| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2918 |
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| Symbol | |
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| ID | 6286438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3031777 |
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| End bp | 3032820 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626488 |
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| Product | twitching motility protein |
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| Protein accession | YP_001900473 |
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| Protein GI | 187929986 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG CGCAGCTTCT GGCGTTTTCC GCCAAGAACA AGGCGTCGGA CTTGCACCTG
TCGGCCGGAC TGCCGCCGAT GATCCGGATC CACGGCGACA TGCGCCGGAT CAACGTGCCC
CCGCTCACGC ACCAAGATGT GCACTCCATG GTGTACGACA TCATGAGCGA CGGGCAGCGC
AAGGTCTACG AAGAAAACCT GGAAGTCGAC TTCTCGTTTG AGATCCCGGG GCTCTCGCGT
TTCCGGGTCA ATGCGTTCAA CCAGAATCGC GGCGCTTCGG CCGTGTTCCG GACGATTCCG
TCGAAGGTGC TCTCGCTGGA CGACCTGAAA GCGCCGGCCG TGTTTGCCGA TCTGGCGATG
AAGCCGCGCG GTCTGGTGCT CGTCACGGGC CCGACCGGCT CGGGCAAGTC GACGACGCTT
GCCGCGATGG TCAACCACCG CAACGAAAAC GACATGGGCC ACATCCTCAC GGTGGAGGAC
CCGATCGAAT TCGTGCACGA ATCGAAGAAG AGCCTGATCA ACCAGCGTGA ACTCGGGCCC
CATACCCATT CGTTCGCCAA CGCGCTGAAG TCGGCGCTGC GTGAAGACCC GGATGTGGTG
CTGGTCGGCG AATTGCGTGA CCTTGAAACC ATTCGCCTCG CGCTTACCGC CGCAGAAACC
GGCCACTTGG TGTTCGGCAC GCTGCACACC AGCTCGGCAG CCAAGACCAT CGACCGGGTC
GTCGACGTGT TTCCGTCGGA CGAAAAAGAG ATGGTCCGGA CCATGCTTTC CGAATCGCTG
GAGGCGGTGA TCTCGCAGAC GCTGCTCAAG ACGCGCGATG GTTCGGGCCG GATCGCGGCG
CACGAAATCA TGATTGCCAC GCCGGCCATT CGTCACTTGA TCCGCGAGAA CAAGATCTCG
CAGATGTACT CGATGATGCA GACCAGCAGC GGCATGGGCA TGCAGACGCT CGACCAGTGC
CTGTCGGAGC TGATCAAGCG CTCGGCGATC AACTACGCAG ACGCGCGCGC CATTGCCAAG
AACCCAGACG CGTTCGTGAG CTGA
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| Protein sequence | MDIAQLLAFS AKNKASDLHL SAGLPPMIRI HGDMRRINVP PLTHQDVHSM VYDIMSDGQR
KVYEENLEVD FSFEIPGLSR FRVNAFNQNR GASAVFRTIP SKVLSLDDLK APAVFADLAM
KPRGLVLVTG PTGSGKSTTL AAMVNHRNEN DMGHILTVED PIEFVHESKK SLINQRELGP
HTHSFANALK SALREDPDVV LVGELRDLET IRLALTAAET GHLVFGTLHT SSAAKTIDRV
VDVFPSDEKE MVRTMLSESL EAVISQTLLK TRDGSGRIAA HEIMIATPAI RHLIRENKIS
QMYSMMQTSS GMGMQTLDQC LSELIKRSAI NYADARAIAK NPDAFVS
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