| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2917 |
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| Symbol | |
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| ID | 6286437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3030571 |
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| End bp | 3031710 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642626487 |
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| Product | twitching motility protein |
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| Protein accession | YP_001900472 |
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| Protein GI | 187929985 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACC GCGAAGCCGC CACCAAATAC ATCCACGAAC TCTTGCAGTT GATGGTGAAC
AGCCGTGGCT CGGACTTGTT CATCACGGCA GAATTTCCGC CCGCGATCAA GGTGGACGGC
AAGGTCACGC CGATCTCGCA GCAGCCGCTG AATGCCCAGC AGGCCGTCGG TCTGGTCAAG
GCGATCATGA ACGAGAAGCA GCTGCGCGAG TACGAAGACA GCTCGGAATG CAACTTCGCC
ATCACGGCGC CGGGCGCCGG GCGATTCCGC GTGTCGGCGT TCATGCAGCA AGGTCGCGCC
GGCATGGTGC TGCGGACCAT CAACACGAAG ATCCCGACGC TGGGCGAGTT GGACCTGCCG
CCGATCCTCA ATGAGATCGT GATGAGCAAG CGCGGCCTCG TGATCGTCGT GGGCGCCACG
GGCTCGGGTA AGTCGACCTC GCTGGCGGCG ATGGTGGGCT ATCGCAATGC GAATTCGTAC
GGCCACATCA TCACCATTGA AGATCCGGTG GAATACGTGC ACGCGCACCA GAACTGCGTG
GTGACGCAGC GCGAGGTGGG TGTGGATACC GAGTCGTGGC ACGTGGCGCT GAAGAACACG
CTGCGGCAGG CGCCGGACGT GATCCTGATC GGCGAAATCC GGGATCGCGA CACGATGGAA
TACGCCATCC AGTACGCGGA AACCGGCTAC TTGTGCCTTG CCACGCTGCA CGCCAACAGC
TCGAACCAGG CGATCGACCG GATCATCAAC TTCTTCCCGG AAGAGAAGCG TCAGCAGCTG
CTGATCGACC TGTCGCTGAA CCTGCGCGCG ATGATTGCGC AACGCCTGCT GCCGCGTCAG
GGCAAGAAGG GGCGCGTACC GGCCGTCGAG ATCATGCTGG CGACCCCGCT GGTGCAAGAC
CTCATCTTCA AGGGCGAGGT GCACGAGCTG AAGGAGGTCA TGAAGAAATC CCGCGAGCAA
GGGATGATCT CGTTCGACCA GGCGCTGTTC GATTTGTACG AAGAAAACAA GATCACGTAC
GAAGACGCGC TGCGTAATGC CGACTCTCTC AACGATCTGC GGCTGCAGAT CAAACTGCAC
AGCAAGCGGG GCGGGCAGAC GGACCTGTCG GCCGGCACCG AGCATTTGAA TGTCGTCTGA
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| Protein sequence | MLDREAATKY IHELLQLMVN SRGSDLFITA EFPPAIKVDG KVTPISQQPL NAQQAVGLVK
AIMNEKQLRE YEDSSECNFA ITAPGAGRFR VSAFMQQGRA GMVLRTINTK IPTLGELDLP
PILNEIVMSK RGLVIVVGAT GSGKSTSLAA MVGYRNANSY GHIITIEDPV EYVHAHQNCV
VTQREVGVDT ESWHVALKNT LRQAPDVILI GEIRDRDTME YAIQYAETGY LCLATLHANS
SNQAIDRIIN FFPEEKRQQL LIDLSLNLRA MIAQRLLPRQ GKKGRVPAVE IMLATPLVQD
LIFKGEVHEL KEVMKKSREQ GMISFDQALF DLYEENKITY EDALRNADSL NDLRLQIKLH
SKRGGQTDLS AGTEHLNVV
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