Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2909 |
Symbol | |
ID | 6288268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3022687 |
End bp | 3023385 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642626479 |
Product | Helix-turn-helix type 11 domain protein |
Protein accession | YP_001900464 |
Protein GI | 187929977 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCA TGACCCGCCG CGCCGACCGC CTGTTCCAGA TTGCCCAGAT CCTGCGAGGC CGCCGTTTGA CCACGGCGGC CATGCTGGCC GACCGCCTGG GCGTGTCGGA GCGCACGGTG TATCGCGATA TCCGCGATCT ATCCGTCTCA GGCGTACCGA TCGAAGGGGA GGCCGGTATC GGCTACCGCA TGCGGGCAGG CTACGACCTT GCGCCGCTCA TGTTCACCGC CGACGAAGTC GAAGCGCTCG TGGCCGGCGC ACGGATGATC AAGGCGTGGA GTGGTGGCAC CATGGCCGAC TCGGTGGAAG CCGCACTGGA AAAGCTGATG GGCGCCCTGC CCGCCGAGCG CCGCTCCGAA GCCGAGACCA CACGCATCTT CGCGCCCGGC TACGGCATGG GCAGCGAGGT CAAGCAAGTA TTCGACACGT TGCATGCAGC GCTTGGCCGC CACGCTGTTG CGCGGCTTGC TTACCGCGAC GCGCAGGGCC AGTTGACCGA GCGCTGCATC CAACCGCTCG GCCTGTTCTT CTGGGGACAA GTCTGGCTGG TGGCCGCCTG GTGCGAACAC CGTCAGGACT ACCGCACCTT CCGCCTCGAC CGCTGCGTCA AGGTCGACAT TCTGGAGCGC CACTTTGCCG AATCCGCCGA GCGCTCGCTG GCGGATTTCA TGCGCAAGGT GCGAGGCTCG TCGGATTGA
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Protein sequence | MPRMTRRADR LFQIAQILRG RRLTTAAMLA DRLGVSERTV YRDIRDLSVS GVPIEGEAGI GYRMRAGYDL APLMFTADEV EALVAGARMI KAWSGGTMAD SVEAALEKLM GALPAERRSE AETTRIFAPG YGMGSEVKQV FDTLHAALGR HAVARLAYRD AQGQLTERCI QPLGLFFWGQ VWLVAAWCEH RQDYRTFRLD RCVKVDILER HFAESAERSL ADFMRKVRGS SD
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