Gene Rpic_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2908 
Symbol 
ID6288267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3022166 
End bp3022645 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content63% 
IMG OID642626478 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_001900463 
Protein GI187929976 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCC AATCCCCGTA TCTCATGCGT GCCGCGGATG TCACCGCGCG CACGCAGTCG 
TTTTCGCACC CCTGGAACAG CCTGTCGGAA ATTCACGGCA CCATGATGGG CCGGCTGCTC
GGGCTCAAAC GTACCGGCGT GAATTTCGCG CGCGTGCCGC CGGGCAAGGA GTCGTTCGTC
TATCACTCGC ACCAGCGCGA GGAGGAATGG ATCTACATCC TTTCCGGCGA AGCGCAGGCC
GAGATCGACG ACAGCATCTT CACCGTGCGC GGCGGCGATT TCATGGCCTT CCCCACAGGC
GTCGCGCATC ACCTGCGCAA CTGCGGCAAG GACGATCTCG TCTATCTGTG CGGCGGCGAA
CATCTCAACA TCGAGATTGC CGATTTCCCG CGACTGGGCA AGCGCATGCT GCGCCGTGGG
GAGCAGGTCG ATATCGTCGA CATCCACCCG CAGCGCGAGT TGACGCCCTT CGGCGCGTAG
 
Protein sequence
MPSQSPYLMR AADVTARTQS FSHPWNSLSE IHGTMMGRLL GLKRTGVNFA RVPPGKESFV 
YHSHQREEEW IYILSGEAQA EIDDSIFTVR GGDFMAFPTG VAHHLRNCGK DDLVYLCGGE
HLNIEIADFP RLGKRMLRRG EQVDIVDIHP QRELTPFGA