Gene Rpic_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2904 
SymbolglcF 
ID6289211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3019118 
End bp3020374 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content68% 
IMG OID642626474 
Productglycolate oxidase iron-sulfur subunit 
Protein accessionYP_001900459 
Protein GI187929972 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA CGCTCGCGGC GTTCCTGCGC AACACCCCCG ACGGCGAAGA AGCCCAAAGC 
ATCGTGCAGA AGTGCGTGCA CTGCGGTTTC TGCACGGCCA CCTGCCCGAC CTACCAACTG
CTCGGCGATG AGCTGGACGG CCCGCGCGGG CGCATCTACC TGATGAAGCA GGTGCTGGAG
GGCCAGCCCG CCGGCGCCGC TACACGCCTG CACCTCGACC GCTGCCTGAC CTGCCGCAAC
TGCGAATCGA CCTGCCCGTC CGGCGTGACC TACGGGCGCC TGGTGGAGAT CGGCCGCAAG
ATCGTCGATG ACCAGCTCGA CGCGAAAGGC GGGGTGGGCT CAATGCGACG CCCGTTGGGC
GAGCGCGCCG TGCGCTGGGC GCTGCGCGAG GGCCTGACGC GGCCGGCGCT GTTCGGCTCC
GCGCTCAAGC TCGGACAGGC GGTGCGGCCG ATGTTGCCGC CAGTGCTGCG CAACAAGGTT
CCGGCCCGGC AGCCGCACGC CGGCACGCGA CCCGGCACCG TGCACGCTCG CAAGATGCTG
CTGCTTGAAG GCTGCGTGCA ACCCGCCATG TCGCCCAACA TCAATGCCGC CACGGCGCGT
GTCTTCGACA AGCTGGGCGT GCAGCTCATC AGCGCGGACC GCGCCGGCTG CTGCGGCGCC
ATCCGTTATC ACATGAACGA CCATGCGGGC GGCCTCGGCA ACATGCGCGC CAACATCGAC
GCCTGGTGGC CGCATATCGA GGCCGGCGCC GAGGCCATCG TCATGACGGC CTCCGGCTGC
GGTGCGATGG TCAAGGAATA CGGCCACCTG CTGCGCGACG ATCCGGCCTA TGCAGAGCGC
GCGGCGCGCG TGTCCGCCAT GACGCGCGAT CTGTGCGAGC TGCTGCCCGC GTTCTCGCAA
CAGCTTCTAC AGAAGACCAA ACCTGAAGCA CAACGCCCGC GCGTGGCTTG GCACCCGCCC
TGCACGCTGC AACACGGCCA GCAGATTCGC GGCGCAGTGG AAACGCTGCT CGCCTCGCTG
GGCGTGGACG TCAAGCTCTG CGCCGACAGC CACCTGTGCT GCGGCTCGGC CGGCACCTAT
TCGGTGCTGC AACCGGAACT TGCCTATCGC CTGCGCGATG ACAAGCTCGC CAAGCTGCAA
GCCACGCAGC CTGAGCGCAT CGTCTCCGCC AACATCGGCT GCCTGACGCA TCTGCAGAGC
GGCACGGATA CGCCGGTCGA ACACTGGATC GAGCTGGTCG ACCGCATGCT GGCCTGA
 
Protein sequence
MQITLAAFLR NTPDGEEAQS IVQKCVHCGF CTATCPTYQL LGDELDGPRG RIYLMKQVLE 
GQPAGAATRL HLDRCLTCRN CESTCPSGVT YGRLVEIGRK IVDDQLDAKG GVGSMRRPLG
ERAVRWALRE GLTRPALFGS ALKLGQAVRP MLPPVLRNKV PARQPHAGTR PGTVHARKML
LLEGCVQPAM SPNINAATAR VFDKLGVQLI SADRAGCCGA IRYHMNDHAG GLGNMRANID
AWWPHIEAGA EAIVMTASGC GAMVKEYGHL LRDDPAYAER AARVSAMTRD LCELLPAFSQ
QLLQKTKPEA QRPRVAWHPP CTLQHGQQIR GAVETLLASL GVDVKLCADS HLCCGSAGTY
SVLQPELAYR LRDDKLAKLQ ATQPERIVSA NIGCLTHLQS GTDTPVEHWI ELVDRMLA