| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2900 |
|---|
| Symbol | |
|---|
| ID | 6286101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3013586 |
|---|
| End bp | 3015004 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642626470 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_001900455 |
|---|
| Protein GI | 187929968 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATC CAGCCCCGCC CTCCCAGATC ATCCGCAAGC CGATTCCCCC GGCCATGCTC
GACGCGCTGC GCACCCGCTT CGGCGATCGC GTCTCCATGA GCGAAGCCGT GCGCGCCCAC
CACGGCCGCG ATGAATCCGC CTACGACCCG ATGCTGCCCG ACGCCGTCGT CTTCGCGCAG
ACCACCGAGG AAGTCGCTGC CGTCGCCAAG CTCTGCTTCG AGCACGAGAT TCCGCTGATC
CCGTATGGCG CCGGATCGTC GCTCGAAGGC CATCTGCTGG CCGTGGCCGG TGGCGTGAGC
CTCGATCTCT CGCAGATGAA CCACGTGCTG TCGGTGCACT CCGAAGACCT GACGGTGACG
GTCGAGCCGG GCGTCACGCG CAAGCAGCTC AATACCGAGA TTCGCGATAC CGGTTTGTTC
TTCCCGATCG ACCCGGGCGC GGATGCATCC ATCGGCGGCA TGTGCGCGAC GCGCGCTTCG
GGCACCAACG CCGTGCGTTA CGGCACGATG CGCGAAAACG TCCTGAACCT GACGGTGGTC
ACCGCTGACG GCCACATCAT CAAGACGGCC AACCGCGCAC GTAAATCGTC GGCGGGGTAT
GACCTCACAC GCCTCTTCAT CGGCAGCGAG GGGACGCTTG GCATCATCAC CGAGATCACG
CTGAAGCTGT ATCCGCAGCC CGAAGCGGTA TCCGCGGCCG TGTGCGCCTT CCCGAGCATG
GGCGATGCGG TGTCGGCAGT GATCGACACT ATCCAGATGG GCGTGCCGAT TGCGCGCGTG
GAATTTGTCG ATGCGCTGGC CATCCGCGCG ATCAACCAGT ACGACAAGCT CACGCTGCCC
GAGATGCCGA CGCTGTTCTT CGAGTTTCAC GGCTCGGAGC ACGGCGTGCA GGAGCAGGCC
GAGACCGTCC AGCAGATCAC TGCTGAACAC AAGGGCCAAG GCTTCGAATG GGCCACGCGC
CCCGAAGACC GCAGCCGCCT GTGGAACGCT CGCCACAACG CCTATTTCGC CTTTCTGCAA
CTCAAGCCGG GCTGCCGCGC CGTCACCACC GACGTATGCG TGCCGATCTC GCGCCTGGCT
GAATGCGTGG TCGAGACCGA GAAGGACCTG CTTGCCAGCG CGCTGCAGCT GCCCGCCCCC
ATCGTCGGCC ACGTGGGCGA CGGCAACTTC CACGTTGCGC TGCTGATCGA CCCGAACAAG
CCGGAAGAAC TGGAAGAGGC CGAGCGCATC AACCAGCGCA TCGTCGCCCG TGCAATTGCC
ATGGACGGCA CCTGCACGGG CGAGCATGGC GTGGGTCTGC ACAAGATGGA CTTCCTCATC
GCCGAACACG GCAACGATGC GATCGACCTG ATGCGCAGCA TCAAGCAGGC GCTGGACCCG
AAGCACGTCC TGAACCCCGG CAAGATCTTC CACGTGTAA
|
|---|
| Protein sequence | MNHPAPPSQI IRKPIPPAML DALRTRFGDR VSMSEAVRAH HGRDESAYDP MLPDAVVFAQ
TTEEVAAVAK LCFEHEIPLI PYGAGSSLEG HLLAVAGGVS LDLSQMNHVL SVHSEDLTVT
VEPGVTRKQL NTEIRDTGLF FPIDPGADAS IGGMCATRAS GTNAVRYGTM RENVLNLTVV
TADGHIIKTA NRARKSSAGY DLTRLFIGSE GTLGIITEIT LKLYPQPEAV SAAVCAFPSM
GDAVSAVIDT IQMGVPIARV EFVDALAIRA INQYDKLTLP EMPTLFFEFH GSEHGVQEQA
ETVQQITAEH KGQGFEWATR PEDRSRLWNA RHNAYFAFLQ LKPGCRAVTT DVCVPISRLA
ECVVETEKDL LASALQLPAP IVGHVGDGNF HVALLIDPNK PEELEEAERI NQRIVARAIA
MDGTCTGEHG VGLHKMDFLI AEHGNDAIDL MRSIKQALDP KHVLNPGKIF HV
|
|---|
| |