Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2898 |
Symbol | |
ID | 6286091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3011934 |
End bp | 3012836 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626468 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_001900453 |
Protein GI | 187929966 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGACA ACCTGGCGGA CACCGCCGTC AACACCGCAA GCAAGTACCA GGCAATCGTG GCGCAATACG CCACCGACGT CGGCATGAAG ATCCTCGGCG CGATCGTTTT CTGGGTGGTC GGCCGCTGGC TGATCAATCT GGCGGTGCGC ATGGTGGAAG GCTCGTTGAG CCGACAGAAG GTCGATCCGA CCGTGCTGCG GTATGTCGGC TCCATCATCA CCGTCACGCT GAATGTGCTG CTGGTGATCG GCATCCTCGG CTATTTCGGC ATCCAGACGA CGACGTTCGC GGCGCTGATT GCCGCAGCCG GTGTGGCGAT CGGCATGGCA TGGTCGGGCC TGCTGTCGAA CTTTGCTGCG GGCGCGTTCC TGATCGTGCT GCGGCCGTTC AAGGTGGGCG ACTTCGTGAC GGCCGGCGGC GTGACGGGCA CCATCAAGGA GATCGGCCTG TTTGCCACGA CCATCAACAC GCCAGACAAC GTGGTCAGCA TTGTCGGCAA CGGCAAGATC TTCGCGGACA CGATCCAGAA CTACACCTCC AACCCCTTCC GCCGCGTCGA GCTGAAGGCA CAACTGGCCG GAAGCGCCGA CCACCGCGCC GCCATCGCGC TGCTCAAGGA GAAGGTGGCC GCCATTCCCA ACGTGCTGAC CGAACCGGCG GTCGATGTTG AAATCCTGGA ATTCAACCTG GTCGGGCCGG TGCTGGCCGT GCGCCCGTAC ACGCACAACG ACAACTACTG GCAGGTCTAT TTCGACACCA ACCGCACCAT CAAGGAAGCG CTGGCCGAAG CCGGCTTCCC GGCGCCGACG CCATCGCAGG CGCTGACCAT CACCACGCCG GGGCAATTGG CGGGGCTGGC CGCCGTGGCG CAAAGCACGA CGACACCAAC GAGCGTGAAC TAA
|
Protein sequence | MADNLADTAV NTASKYQAIV AQYATDVGMK ILGAIVFWVV GRWLINLAVR MVEGSLSRQK VDPTVLRYVG SIITVTLNVL LVIGILGYFG IQTTTFAALI AAAGVAIGMA WSGLLSNFAA GAFLIVLRPF KVGDFVTAGG VTGTIKEIGL FATTINTPDN VVSIVGNGKI FADTIQNYTS NPFRRVELKA QLAGSADHRA AIALLKEKVA AIPNVLTEPA VDVEILEFNL VGPVLAVRPY THNDNYWQVY FDTNRTIKEA LAEAGFPAPT PSQALTITTP GQLAGLAAVA QSTTTPTSVN
|
| |