Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2882 |
Symbol | |
ID | 6287227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2987909 |
End bp | 2988622 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642626452 |
Product | transcriptional regulator, histidine utilization repressor, GntR family |
Protein accession | YP_001900437 |
Protein GI | 187929950 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACACG ACCCGTCCGC CAGCACGCCC GCCTTCCAGC GCATCAAGGA AGACATCCTC ATGCGCATCC GCAGCGGCGA GTGGCAGGAA GGGGAAATGA TTCCCGGGGA GACCACGCTC GCGCAGACCT TTGGCGTGTC GCGCATGACG GTCAACCGCG CGCTGCGTGA GTTGACCGCC GAGCAGATCC TCACGCGCGT GCAAGGGTTG GGAACGTTCG TCGCGCAGCA GAAATACCAG GCGACGCTGG TGGCGATCCG CAACATCGCC GAGGAAATTG CGGCGCGCGG CCATCGGCAC CGCGCCGAAC TGCACAAGCT GGAACGCGCC CGCGCCAACG AAGCGATGGC GGCTTCGTTT GGTGTGCCGG CCGGCGGCGT GCTCTTCCAT TCGCTGATCG TGCACTTCGA AAACGACTTG CCGATCCAGG TGGAAGACCG TTGGGTGAAC GCGGCGTTGG CGCCCGAATA CATGGAGCAG GATTTCACGC AGACCACGCC GAACGCCTAC CTGATGCGTG CCGCCCCATT GCAGGGCGTG GATTACGGCA TTGAGGCGCG CCTGCCGCCG CGCGAGATTG CGGAGATGCT GCACATGGAC GTGCGCGAGC CCTGCCTGAT GCTGCGGCGG AAAACGCTGT CGCAGGGCCA GGTCGCCTCG GTGGCGACCA TGTGGCATCC CGGCGGGCGT TATCAGTTCA CGGGCAGTTT CTGA
|
Protein sequence | MSHDPSASTP AFQRIKEDIL MRIRSGEWQE GEMIPGETTL AQTFGVSRMT VNRALRELTA EQILTRVQGL GTFVAQQKYQ ATLVAIRNIA EEIAARGHRH RAELHKLERA RANEAMAASF GVPAGGVLFH SLIVHFENDL PIQVEDRWVN AALAPEYMEQ DFTQTTPNAY LMRAAPLQGV DYGIEARLPP REIAEMLHMD VREPCLMLRR KTLSQGQVAS VATMWHPGGR YQFTGSF
|
| |