Gene Rpic_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2874 
Symbol 
ID6287079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2979550 
End bp2980197 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID642626444 
Productheat shock protein GrpE 
Protein accessionYP_001900429 
Protein GI187929942 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA CTTCGGACAC CCCCTCGAAC TCGGACATGC CATCGGACAG CCAAGCCACC 
CAGCCGAACG CATCGGCGAC GGGCCAAGCG GCCCATGCCT ATTCGAGTCA GGCGCAGCGC
GCAAGCGCCG ACGCCCAGGC TGTCGCCGGT GACGAAGCCG CCGTGGCAGA AGCTGTGGCC
GACGTGGACG TCGCTGAACT GCGTCGTCAA CTGGAGGCCG CAGAAGAAAA GGCTCGCCAG
AATTACGAAA ACTGGGCGCG CGCGACGGCC GAAGGCGAGA ACATCCGCCG CCGTGGTCAG
GACGATGTGG CCAAGGCCCA CAAGTTCGCC ATCGAAGGCT TTGCCGAATA CTTGCTGCCG
GTGATGGACA GCCTGCAAGC CGCCTTGGCG GACACGTCGG GCGACGCCAC CAAGCTGCGT
GAGGGCGTTG AACTCACGCT CAAGCAGCTC TACGCCGCGT TCGAGAAGGG CCGTGTGACC
GAGCTGAACC CGGTGGGTGA AAAGTTTGAT CCGCACCGCC ATCAAGCTAT CTCGATGGTG
CCGGCTGACC AGGAAGCCAA CACCGTGGTG GCGGTGCTCC AGCGCGGGTA CACGCTGGCC
GACCGCGTGC TGCGCCCGGC CCTCGTGACG GTGGCGGCTC CCAAGTGA
 
Protein sequence
MKHTSDTPSN SDMPSDSQAT QPNASATGQA AHAYSSQAQR ASADAQAVAG DEAAVAEAVA 
DVDVAELRRQ LEAAEEKARQ NYENWARATA EGENIRRRGQ DDVAKAHKFA IEGFAEYLLP
VMDSLQAALA DTSGDATKLR EGVELTLKQL YAAFEKGRVT ELNPVGEKFD PHRHQAISMV
PADQEANTVV AVLQRGYTLA DRVLRPALVT VAAPK