Gene Rpic_2861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2861 
Symbol 
ID6287634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2965865 
End bp2966539 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID642626431 
ProductHAD-superfamily subfamily IB hydrolase, TIGR01490 
Protein accessionYP_001900416 
Protein GI187929929 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.077288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGG CCCTCTTCGA CCTCGATCAC ACCCTCATCC CCACCGACAG CGACCACGAG 
TGGGGACGCT TCCTCATTCG CCGCGGCGTG GTGGATGCGT CCGAATACCA GCGCAAGAAC
GATCAGTTCT ATGCCGACTA CAAAGCCGGC ACGCTGGATA TCCACGCGTT TCTGCGCTTT
GCCCTGGCAC CGCTCGCTGC CCACCCGCGC GACACGCTCG CCCAGTGGCA CGCCGAGTTC
ATGCACGACG TGATCCGTCC GAAGATCACG CCGCAAGCGC AAGCGCTGGT CTACAAGCAC
CTGGACGCCG GCGACCTGTG CTGCGTGGTC ACCGCCACCA ACAGCTTCGT CACCCGCCCG
ATTGCCGAGG CGTTCGGCAT CGATCACCTG ATCGCCACCG AACCGGCCAC CACCGACGGC
AGCCCGGACA GCGCCTTCAC CGGCGATGTG GCCGGCACAC CGAGCTTCCG TGAAGGCAAG
GTTGCGCGCG TGCACGAGTG GCTGGCCAAC ATGGGCCGCG GCTGGAGCGA TTTCGAGCGA
AGCACCTTCT ACAGCGATTC GGCCAACGAC GTGCCGCTGC TGGAGGAAGT GACTGACCCC
GTCGCCACCA ACCCGGACGA CACGCTGCGC AACCTCGCAG CCGCGCGCAA CTGGCGCATC
ATGGATCTCT TCTAA
 
Protein sequence
MNLALFDLDH TLIPTDSDHE WGRFLIRRGV VDASEYQRKN DQFYADYKAG TLDIHAFLRF 
ALAPLAAHPR DTLAQWHAEF MHDVIRPKIT PQAQALVYKH LDAGDLCCVV TATNSFVTRP
IAEAFGIDHL IATEPATTDG SPDSAFTGDV AGTPSFREGK VARVHEWLAN MGRGWSDFER
STFYSDSAND VPLLEEVTDP VATNPDDTLR NLAAARNWRI MDLF