Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2856 |
Symbol | |
ID | 6288111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2960865 |
End bp | 2961950 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642626426 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001900411 |
Protein GI | 187929924 |
COG category | [F] Nucleotide transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase [COG2169] Adenosine deaminase |
TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCT CCGCCCGCCC CGTACCGGAC ACCACCCTCG TCGAACACGA CCCGCGCTGG GCTCGCGTGC TGGCGCGCGA TGCCTCTGCC GACGGGCAAT TCGTCTATGC GGTGAAGACC ACCGGCGTGT ATTGCCAGCC GAGCAGCCCG TCGCGCCTGC CGCGCCCCGA AAATGTCGAG TTCTTCGAAA CGCCTGCCGA CGCAGAAGCC GCCGGTTACC GCCCGAGCCG CCGTGCTGGC CCGGATCAGA CCACCGTCCG GGCGCAGCAA ACCGCGCTCG TCGCGCAAGC GTGCCGGCGC ATTGAAGCAG CCGACACGCC GCCCACGCTC GACGCGCTGG CGCAAGACGC CAGCCTGAGC CCGTATCACT TCCATCGTCT GTTCAAAAGC GTCACCGGCC TCACGCCCAA GGCCTATGCC GATGCGCATC GCGCCCGCAA GCTGCGCGCG CAACTGGAAC GCGGCAGCAG CGTCACCGAA GCCATCTACG ACGCCGGATT CAACGCCAGC AGCCGCTTCT ACGAGGCGTC GGACAACGTG CTCGGCATGA CGGCCAGCCG CTACCGCGCA GGCGGCGCAC AGACGACGAT CCGCTTTGCC GTGGGCGAAT GCTCGCTCGG CTCGATCTTG GTGGCGCAGA GCGATCGCGG CATCTGCGCG ATCCTGATGG GCGACGACCC CGACGCGCTC GTGCGCGATC TGCAGGACAC CTTCCCGAAG GCCGAACTCA TCGGCGGCGA TGCGAGCTTC GAAAATCTGG TGGCGAAAGT GGTGGGTTTT GTCGAAGCGC CGTCCATCGG CCTGGACCTA CCGCTGGACG TGCGCGGCAC CGCGTTTCAG GAGCGCGTGT GGCAGGCGCT GCGCGAAGTG CCGCCGGGCA GCACCACCAG CTACACCGAG ATTGCCGCGC GCATCGGTGC CCCCAGGGCG GTGCGCGCGG TGGCGCAGGC CTGCGCGGCC AACCACATTG CGGTGGCCAT CCCATGTCAT CGCGTGATCC GCCGAGACGG CAACGCCTCG GGGTATCGCT GGGGCGTGGA GCGCAAGCTG GCGCTGCTGG AGCGCGAGGC GCAATCCGCT GCATGA
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Protein sequence | MQTSARPVPD TTLVEHDPRW ARVLARDASA DGQFVYAVKT TGVYCQPSSP SRLPRPENVE FFETPADAEA AGYRPSRRAG PDQTTVRAQQ TALVAQACRR IEAADTPPTL DALAQDASLS PYHFHRLFKS VTGLTPKAYA DAHRARKLRA QLERGSSVTE AIYDAGFNAS SRFYEASDNV LGMTASRYRA GGAQTTIRFA VGECSLGSIL VAQSDRGICA ILMGDDPDAL VRDLQDTFPK AELIGGDASF ENLVAKVVGF VEAPSIGLDL PLDVRGTAFQ ERVWQALREV PPGSTTSYTE IAARIGAPRA VRAVAQACAA NHIAVAIPCH RVIRRDGNAS GYRWGVERKL ALLEREAQSA A
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