Gene Rpic_2856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2856 
Symbol 
ID6288111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2960865 
End bp2961950 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content69% 
IMG OID642626426 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001900411 
Protein GI187929924 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase
[COG2169] Adenosine deaminase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCT CCGCCCGCCC CGTACCGGAC ACCACCCTCG TCGAACACGA CCCGCGCTGG 
GCTCGCGTGC TGGCGCGCGA TGCCTCTGCC GACGGGCAAT TCGTCTATGC GGTGAAGACC
ACCGGCGTGT ATTGCCAGCC GAGCAGCCCG TCGCGCCTGC CGCGCCCCGA AAATGTCGAG
TTCTTCGAAA CGCCTGCCGA CGCAGAAGCC GCCGGTTACC GCCCGAGCCG CCGTGCTGGC
CCGGATCAGA CCACCGTCCG GGCGCAGCAA ACCGCGCTCG TCGCGCAAGC GTGCCGGCGC
ATTGAAGCAG CCGACACGCC GCCCACGCTC GACGCGCTGG CGCAAGACGC CAGCCTGAGC
CCGTATCACT TCCATCGTCT GTTCAAAAGC GTCACCGGCC TCACGCCCAA GGCCTATGCC
GATGCGCATC GCGCCCGCAA GCTGCGCGCG CAACTGGAAC GCGGCAGCAG CGTCACCGAA
GCCATCTACG ACGCCGGATT CAACGCCAGC AGCCGCTTCT ACGAGGCGTC GGACAACGTG
CTCGGCATGA CGGCCAGCCG CTACCGCGCA GGCGGCGCAC AGACGACGAT CCGCTTTGCC
GTGGGCGAAT GCTCGCTCGG CTCGATCTTG GTGGCGCAGA GCGATCGCGG CATCTGCGCG
ATCCTGATGG GCGACGACCC CGACGCGCTC GTGCGCGATC TGCAGGACAC CTTCCCGAAG
GCCGAACTCA TCGGCGGCGA TGCGAGCTTC GAAAATCTGG TGGCGAAAGT GGTGGGTTTT
GTCGAAGCGC CGTCCATCGG CCTGGACCTA CCGCTGGACG TGCGCGGCAC CGCGTTTCAG
GAGCGCGTGT GGCAGGCGCT GCGCGAAGTG CCGCCGGGCA GCACCACCAG CTACACCGAG
ATTGCCGCGC GCATCGGTGC CCCCAGGGCG GTGCGCGCGG TGGCGCAGGC CTGCGCGGCC
AACCACATTG CGGTGGCCAT CCCATGTCAT CGCGTGATCC GCCGAGACGG CAACGCCTCG
GGGTATCGCT GGGGCGTGGA GCGCAAGCTG GCGCTGCTGG AGCGCGAGGC GCAATCCGCT
GCATGA
 
Protein sequence
MQTSARPVPD TTLVEHDPRW ARVLARDASA DGQFVYAVKT TGVYCQPSSP SRLPRPENVE 
FFETPADAEA AGYRPSRRAG PDQTTVRAQQ TALVAQACRR IEAADTPPTL DALAQDASLS
PYHFHRLFKS VTGLTPKAYA DAHRARKLRA QLERGSSVTE AIYDAGFNAS SRFYEASDNV
LGMTASRYRA GGAQTTIRFA VGECSLGSIL VAQSDRGICA ILMGDDPDAL VRDLQDTFPK
AELIGGDASF ENLVAKVVGF VEAPSIGLDL PLDVRGTAFQ ERVWQALREV PPGSTTSYTE
IAARIGAPRA VRAVAQACAA NHIAVAIPCH RVIRRDGNAS GYRWGVERKL ALLEREAQSA
A