| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2852 |
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| Symbol | |
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| ID | 6286930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2956853 |
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| End bp | 2958871 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642626422 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001900407 |
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| Protein GI | 187929920 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCG AGCTAGGCCA TTTCGCGTTG ATCCTGGCGT TGCTGACTGC TGCCATGCAA
TCCGTGCTGC CGCTGGTTGG CGCAGCGCGC GACGACGAGC GTTGGATGGC CGTGGCGCGA
CCCGCTGCGC GCATGCAATG TGCATTGGTT CTCGTGGCGT ATGGCGCGCT GACATGGGCC
TTCGTCAGCA ACGACTTCAG CGTGCTCTAT GTCGCCGCCA ACTCGAACAG CGCGCTGCCG
CTGCCCTATC GCGTGGCCGC CGTGTGGGGC GGACACGAGG GATCGATGTT GCTTTGGACG
GCGATGCTGG CGTTGTGGTC GCTGGCCGTG TCGTTGTTCA GCCGTCAACT GCCGTTGCCC
GTGGTGGCGC GCGTGCTGGG CGTGATGGGC GCCATCAGCA CGGGGCTGCT GCTTTTCTTG
CTGTTCGCAT CCAACCCATT CCTGCGCCTG TTGCCGCCTG CCCTGGAAGG GCGCGACCTC
AACCCGCTGC TGCAAGACCC GGGCATGGTG TCGCATCCAC CCATGCTCTA CATGGGTTAC
GTGGGCTTTG CCGTGGCGTT CTCGTTTGCG ATGGCCGCGC TGCTGTCGGG CCGGCTCGAT
GCCACCTGGG CGCGCTGGTC GCGGCCGTGG ACGACCGCCG CCTGGGCATG CCTGACGACC
GGCATCATGC TCGGCAGCGC ATGGGCGTAC TACGAACTCG GCTGGGGCGG CTGGTGGTTC
TGGGACCCGG TCGAAAACGC GTCTTTCATG CCGTGGCTGG CAGGCACGGC ACTGATCCAC
TCGTTGGCGG TGACGGAAAA GCGCGGCGTG TTCCGCGCAT GGACGGCGCT GCTGGCCATC
TTCACGTTCT CGCTCAGTCT GCTCGGCACG TTCCTCGTCC GCTCGGGCGT GCTGACGTCG
GTGCACGCCT TTGCGGTCGA CCCGAAGCGC GGTCTCTTCA TCCTCGCGTT GCTGGGCATC
GTAACGGGCG GCGCCCTCGG TCTGTTTGCG TGGCGCGCAA AGCGGTTGTC CAGCAGCGCC
TCGGAAGGCG CGACGTTCCC GCTGTTCGCG CGTGAATCGT TCCTGCTGGC CAACAACGTG
CTGCTGGCGG TGGCGGCCGC CACGGTATTG CTTGGCACGC TGTATCCGCT TTTGCTGGAT
GTGCTGCGGC TGGGCAAGAT CTCGGTCGGG CAAGCGTATT TCGAACAGGT CTTTGTGCCG
CTGATGTCTC CTGCGGTGCT GCTGATGGGT GCCGCGCCAC TGGCACGCTG GCGTCACGGT
GCGCTGCCGT CGATGGCGGT GCGGCTGCGA TGGGCAGCAG TGGCGAGTGT TGCCGTCGGG
CTCGGACTGG CGGTGTTGTA TCGGACGTCC GCGCTGGCGG GCCTGGGGCT GACGCTCGCC
GCATGGTGTC TTGTGAGCGC GCTGGCCAGT CTGGCCGAAA AGCTTCGCCA GCCCGGCAAT
CGATTGACGA CGCTGCGGCA ATTGCCGCCG AGCTACTTTG GCATGCTCGT GGCGCACGCG
GGGGTCGGCG TGTTCATTGC GGGTGTCACG CTGGTGCTCA GCCAGGAGAC GCTACGCGAG
CTGCCGGTGC GCGTGGGCGG CAAGGTGGAG GTGGGCGGCT ACATGTTCCA CCTCGCCAGC
GTTGCGCCTG CGCAGGGCCC CAACTACGAC GTCTTGCGCG GCCATGTCGA CGTCAGCCGC
AACGGCAAAC CCGTGGCCAC GCTGCTACCC GAGCGGCGCC TGTACCACAG CCAGGAAAAT
CCCACGACCG AAGTCGCCAT CGACAGCGGC ATCACGCGCG ATCTCTATGT CGCGCTTGGT
GAATCACTCG GACAAGACAA CTGGGCCATG CGCATCTACA TCAAGCCCTT TGTCGGCTGG
ATCTGGGCAG GCTGTGTGCT GATGGTGCTG GGCGGGCTGC TGGCCGTGTG CGACCGCCGC
TACCGGCTGC GCCGCCGCTC CACGTCATCG CGCGCCGCGC CCGACACTGC ACGGGGCGGC
CCGTCATTAG CGATGCCAGC GACCGAGGAG CTACGGTGA
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| Protein sequence | MIAELGHFAL ILALLTAAMQ SVLPLVGAAR DDERWMAVAR PAARMQCALV LVAYGALTWA
FVSNDFSVLY VAANSNSALP LPYRVAAVWG GHEGSMLLWT AMLALWSLAV SLFSRQLPLP
VVARVLGVMG AISTGLLLFL LFASNPFLRL LPPALEGRDL NPLLQDPGMV SHPPMLYMGY
VGFAVAFSFA MAALLSGRLD ATWARWSRPW TTAAWACLTT GIMLGSAWAY YELGWGGWWF
WDPVENASFM PWLAGTALIH SLAVTEKRGV FRAWTALLAI FTFSLSLLGT FLVRSGVLTS
VHAFAVDPKR GLFILALLGI VTGGALGLFA WRAKRLSSSA SEGATFPLFA RESFLLANNV
LLAVAAATVL LGTLYPLLLD VLRLGKISVG QAYFEQVFVP LMSPAVLLMG AAPLARWRHG
ALPSMAVRLR WAAVASVAVG LGLAVLYRTS ALAGLGLTLA AWCLVSALAS LAEKLRQPGN
RLTTLRQLPP SYFGMLVAHA GVGVFIAGVT LVLSQETLRE LPVRVGGKVE VGGYMFHLAS
VAPAQGPNYD VLRGHVDVSR NGKPVATLLP ERRLYHSQEN PTTEVAIDSG ITRDLYVALG
ESLGQDNWAM RIYIKPFVGW IWAGCVLMVL GGLLAVCDRR YRLRRRSTSS RAAPDTARGG
PSLAMPATEE LR
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