Gene Rpic_2849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2849 
Symbol 
ID6288964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2955452 
End bp2956240 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID642626419 
Productheme exporter protein CcmC 
Protein accessionYP_001900404 
Protein GI187929917 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01191] heme exporter protein CcmC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC GATCAGGACT CCACACCCCT CCCATTGCCG CCCCGCGCGA ACCTGCCTCC 
CGGCGCTGGA ACTGGCTCGC GTATGCGTCG CCCGTGCGGT TTGATCCACT CGCGCGCAAG
CTGGTGCCGT GGTTTGGCGC GGCGGCACTC ATGTTCCTTG TCGCGGGCCT CTACGTCGGC
TTTGTGGTGG CGCCCACCGA TGCGCAGCAG GGCGAGGTCT ACCGCATCAT CTTCCTGCAC
GTGCCGGCTG CGTGGATGTC GATGTTCATC TATCTGGTGA TGGCCGGCTA TTGCGCGCTG
GCGCTGGTGC TGCACACACG GCTTTCGTCG ATGATGGCCT CGGCGCTGGC ACCCACCGGC
GCGCTGTTCA CTGCCATTGC GCTGTGGACA GGCGCGCTGT GGGGCAAGCC AACGTGGGGC
ACGTGGTGGG TATGGGATGC GCGCCTGACG TCGGAGTTGC TTCTGCTCTT TCTGTACCTT
GGCTTCATCG CACTGGAGAG CGCCATTGAG GACCCCCGCC GTGCCGAGCG CGCCTGCGCC
GTGCTTGGCG TGGTTGGCGT GGTCAACATC CCCGTGATCT ATTTCTCGGT GCAGTGGTGG
AACACGCTGC ACCAAGGCGC ATCCATCAGC CTGACGGCAG CTCCGTCGAT GGCGATGACG
ATGTTGCTCG GGATGTTGCT GATGACGCTC GCGTGCTGGA TGTACAGCAT CTGCGTGGCG
CTGATTCGCG TGCGCTGCAT CATGCGCGAA CGCGCCGACG ACGACCTCAA CCCAAGCACA
CCGGCATGA
 
Protein sequence
MTNRSGLHTP PIAAPREPAS RRWNWLAYAS PVRFDPLARK LVPWFGAAAL MFLVAGLYVG 
FVVAPTDAQQ GEVYRIIFLH VPAAWMSMFI YLVMAGYCAL ALVLHTRLSS MMASALAPTG
ALFTAIALWT GALWGKPTWG TWWVWDARLT SELLLLFLYL GFIALESAIE DPRRAERACA
VLGVVGVVNI PVIYFSVQWW NTLHQGASIS LTAAPSMAMT MLLGMLLMTL ACWMYSICVA
LIRVRCIMRE RADDDLNPST PA