Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2846 |
Symbol | |
ID | 6289541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2953510 |
End bp | 2954097 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642626416 |
Product | periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
Protein accession | YP_001900401 |
Protein GI | 187929914 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.271621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACC TGATCAAGCG CTACTGGCGC ACCATCAACC GGCCCAGCGC GTATTTCAGC CTGGGCTTTC TAACGTTGGG CGGCTTTGTT GCCGGCGTGG TGTTCTGGGG CGCGTTCAAC ACCGCGATGG AAGTGACCAA TACCGAAGCG TTCTGCACGG GTTGCCACGA AATGCACGAC AACGTGTATC AGGAGCTGCA GAGCACGATC CACTACACCA ACCGCAGCGG CGTACGTGCA ATCTGCTCCA ACTGCCACGT TCCGCACGCC TGGACGAACA AGATTGCTCG GAAGATGCAG GCCTCCAAGG AAGTGTGGGG CAAGATTTTC GGCACCATCG ACACGCGCGA GAAATTCGAG GCCCACCGAC TCGAGCTGGC CCAGCATGAA TGGGATCGGC TGAAGGCCAA CGATTCATTG GAATGCCGCA ACTGCCACAA CTACGAATCG ATGGACTTCA CGCGGCAAAG CCCACGCGCC TCTGCCATGC ATTCCCAATA CCTGGGCAGC AAGGAGAAGA CCTGTATCGA CTGCCACAAG GGCATTGCGC ACCATCTGCC CGACATGTCG AAGATGAAGG CCGAGTGA
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Protein sequence | MFDLIKRYWR TINRPSAYFS LGFLTLGGFV AGVVFWGAFN TAMEVTNTEA FCTGCHEMHD NVYQELQSTI HYTNRSGVRA ICSNCHVPHA WTNKIARKMQ ASKEVWGKIF GTIDTREKFE AHRLELAQHE WDRLKANDSL ECRNCHNYES MDFTRQSPRA SAMHSQYLGS KEKTCIDCHK GIAHHLPDMS KMKAE
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