Gene Rpic_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2846 
Symbol 
ID6289541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2953510 
End bp2954097 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content58% 
IMG OID642626416 
Productperiplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 
Protein accessionYP_001900401 
Protein GI187929914 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.271621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC TGATCAAGCG CTACTGGCGC ACCATCAACC GGCCCAGCGC GTATTTCAGC 
CTGGGCTTTC TAACGTTGGG CGGCTTTGTT GCCGGCGTGG TGTTCTGGGG CGCGTTCAAC
ACCGCGATGG AAGTGACCAA TACCGAAGCG TTCTGCACGG GTTGCCACGA AATGCACGAC
AACGTGTATC AGGAGCTGCA GAGCACGATC CACTACACCA ACCGCAGCGG CGTACGTGCA
ATCTGCTCCA ACTGCCACGT TCCGCACGCC TGGACGAACA AGATTGCTCG GAAGATGCAG
GCCTCCAAGG AAGTGTGGGG CAAGATTTTC GGCACCATCG ACACGCGCGA GAAATTCGAG
GCCCACCGAC TCGAGCTGGC CCAGCATGAA TGGGATCGGC TGAAGGCCAA CGATTCATTG
GAATGCCGCA ACTGCCACAA CTACGAATCG ATGGACTTCA CGCGGCAAAG CCCACGCGCC
TCTGCCATGC ATTCCCAATA CCTGGGCAGC AAGGAGAAGA CCTGTATCGA CTGCCACAAG
GGCATTGCGC ACCATCTGCC CGACATGTCG AAGATGAAGG CCGAGTGA
 
Protein sequence
MFDLIKRYWR TINRPSAYFS LGFLTLGGFV AGVVFWGAFN TAMEVTNTEA FCTGCHEMHD 
NVYQELQSTI HYTNRSGVRA ICSNCHVPHA WTNKIARKMQ ASKEVWGKIF GTIDTREKFE
AHRLELAQHE WDRLKANDSL ECRNCHNYES MDFTRQSPRA SAMHSQYLGS KEKTCIDCHK
GIAHHLPDMS KMKAE