| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2844 |
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| Symbol | |
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| ID | 6289539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2950437 |
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| End bp | 2952953 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626414 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_001900399 |
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| Protein GI | 187929912 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCT CTCGCCGCGC GTTCATTAAG CAGACCGCTG CCGCCGCGAC CGCTTCGGTG
GCCGGCGTCA CGCTTCCTGC TGGCGCCGCC AACCTCGTCA CCGACAAAGA GCTGACGCAG
CTCAAGTGGT CGAAGGCGCC TTGCCGATTC TGCGGCACGG GCTGCGGCGT TGAAGTGGCC
GTCAAAGACA ATCGCGTGGT GGCCACGCAG GGCGACCCGA AGGCCGAGGT CAATCGGGGC
CTGAACTGCG TCAAGGGCTA CTTCCTCTCA AAGATCATGT ACGGCAAGGA CCGGCTGACC
CAGCCGCTGC TGCGCATGAA GAACGGCAAG TACGACAAGA ACGGCGAGTT CACGCCCGTC
ACCTGGGACC GCGCGTTCGA CGAGATGGCG ATGCAGTTCA AGCGCGTCAT CAAGGAAAAG
GGCCCGACCG CTGTCGGCAT GTTCGGCTCG GGTCAATGGA CCGTTTTTGA GGGTTACGCC
GCCGTCAAGC TAATGAAGGC GGGATTCCGC TCGAACAACC TCGACCCCAA CGCGCGCCAC
TGCATGGCCT CTGCCGTGGC CGGCTTCATG CGAACGTTCG GCATGGACGA GCCGATGGGC
TGCTACGACG ATTTCGAAGT CGCTGACGCG TTCGTGCTGT GGGGCTCGAA CATGGCGGAG
ATGCACCCCA TCCTCTGGTC GCGCGTGACG GACCGGCGCC TCTCCGCGCC CAAGACGAAG
GTCGCGGTGC TGTCGACGTT TACGCACCGC TCGTTCGATC TGGCCGATAT CCCGATCGTC
TTCACACCGC AGGCCGATCT CGCGATGCTC AACTACATCG CGAACTACAT CATCACCAAC
AAGAAGGTCA ACACGGACTT CGTCAACAAG CACACCGTCT TCAAGCAGGG CGTGACCGAC
ATCGGCTACG GCCTGCGGCC CGACAACCCC GTGCAGAAGG CCGCCAAGAA CGCCGACAAG
GTGGGTGACT CCAAGCCGAT CTCATTCGAC GAGTTTGCGA AGTTCGTCTC GACGTACGAC
CTGGACTACA CCACCAAGCT GGCGAACCCG GACAAGAGCA AGGAGAAGGA GTTCAAGCAG
CAGCTCCAGA AGCTTGCCGA GCTGTACGCC GATCCGAAGA TCAAGGTCGT GTCGTTCTGG
ACCATGGGTT TCAACCAGCA CACCCGCGGC ACCTGGGCGA ACAACATGAT CTACAACCTG
CACCTGCTGA CAGGGAAGAT CGCCACACCG GGCAACAGCC CTTTCTCCCT GACGGGCCAG
CCTTCGGCAT GCGGCACCGC GCGCGAGGTG GGCACGTTCT CGCACCGCTT GCCGGCCGAC
ATGGTGGTGA CCAACCCGAA GCACCGTGAA GAAGCCGAGC ACATCTGGAA GCTGCCGGCT
GGCACGATCC CTGAAAAGCC CGGCTATCAC GCGGTGCTGC AAAACCGCAT GCTGAAGGAC
GGCAAGCTCA ACGCCTACTG GGTGCAGGTC AACAACAACA TGCAGGCCGG CGCCAACATC
AACGAGGAAG GCTACCCGGG CTACCGCAAT CCGGCGAATT TCATCGTTGT TTCGGACGTG
TACCCGACCG TCACCGCACT GGCCGCCGAC TTGATCCTCC CGAGCGCGAT GTGGGTTGAG
AAGGAAGGCG CCTACGGCAA CGCCGAGCGC CGCACGCAGT TCTGGCATCA ACTCGTTGAT
GCGCCGGGTG AGGCGCGATC CGACCTGTGG CAGCTGGTGG AGTTCTCCAA GCGTTTCAAG
GTGGAAGAAG TCTGGCCCGA AGACCTCATC GCCAAAAAGC CGGAGCTGCG CGGCAAGACC
CTCTACGACG TGCTCTACCG CAACGGCAAT GTCGACAGGT TCCCGCTCAA GGACGTCGAC
CCGGAATACA ACAATGCCGA AGCCAAGGCG TTCGGCTTCT ACCTGCAGAA GGGCCTGTTC
GAGGAGTACG CAAGCTTCGG GCGCGGCCAC GGCCATGACC TGGCACCGTT CGACGATTAT
CACAAGGCGC GCGGATTGCG CTGGCCTGTG GTCAACGGAA AAGAGACGCG CTGGCGCTAC
AAGGAAGGCA GCGATCCGTA CGTCAAGGCC GGCACCGGCT ACCAGTTCTA CGGCAACCCG
GATGGCAAGG CGGTGATCTT CGCCCTGCCC TATGAGGCAC CGCCGGAAGT GCCAGACAAG
GAATACCCGT TCTGGTTGTC GACCGGCCGC GTGCTGGAGC ACTGGCACTC GGGCTCGATG
ACGCGCCGGG TGCCCGAACT GTATCGCGCA TTCCCGAATG CGGTCTGCTT CATGCACCCG
GAAGATGCAA ACGCGCTTGG GCTGCGGCGT GGTGTCGAGG TCGAAGTGAT CTCGCGGCGC
GGCAAGATGC GCACCCGCAT TGAAACGCGC GGCCGCAACC AGCCGCCGAA GGGCCTGGTG
TTCGTGCCGT GGTTCGATGC AAGCCAGCTC ATCAACAAGG TCACACTGGA TGCAACCTGC
CCGATCTCGC TGCAGACGGA TTTCAAGAAG TGCGCCGTCA AGATCGTGAA GGTCTGA
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| Protein sequence | MKVSRRAFIK QTAAAATASV AGVTLPAGAA NLVTDKELTQ LKWSKAPCRF CGTGCGVEVA
VKDNRVVATQ GDPKAEVNRG LNCVKGYFLS KIMYGKDRLT QPLLRMKNGK YDKNGEFTPV
TWDRAFDEMA MQFKRVIKEK GPTAVGMFGS GQWTVFEGYA AVKLMKAGFR SNNLDPNARH
CMASAVAGFM RTFGMDEPMG CYDDFEVADA FVLWGSNMAE MHPILWSRVT DRRLSAPKTK
VAVLSTFTHR SFDLADIPIV FTPQADLAML NYIANYIITN KKVNTDFVNK HTVFKQGVTD
IGYGLRPDNP VQKAAKNADK VGDSKPISFD EFAKFVSTYD LDYTTKLANP DKSKEKEFKQ
QLQKLAELYA DPKIKVVSFW TMGFNQHTRG TWANNMIYNL HLLTGKIATP GNSPFSLTGQ
PSACGTAREV GTFSHRLPAD MVVTNPKHRE EAEHIWKLPA GTIPEKPGYH AVLQNRMLKD
GKLNAYWVQV NNNMQAGANI NEEGYPGYRN PANFIVVSDV YPTVTALAAD LILPSAMWVE
KEGAYGNAER RTQFWHQLVD APGEARSDLW QLVEFSKRFK VEEVWPEDLI AKKPELRGKT
LYDVLYRNGN VDRFPLKDVD PEYNNAEAKA FGFYLQKGLF EEYASFGRGH GHDLAPFDDY
HKARGLRWPV VNGKETRWRY KEGSDPYVKA GTGYQFYGNP DGKAVIFALP YEAPPEVPDK
EYPFWLSTGR VLEHWHSGSM TRRVPELYRA FPNAVCFMHP EDANALGLRR GVEVEVISRR
GKMRTRIETR GRNQPPKGLV FVPWFDASQL INKVTLDATC PISLQTDFKK CAVKIVKV
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