Gene Rpic_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2837 
SymbolmiaA 
ID6288133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2946052 
End bp2947029 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID642626407 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_001900392 
Protein GI187929905 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.988648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCGT CTGCTGCAAG CGCCCCGCGC GCGATTTGCC TGCTCGGGCC GACGGCGTCC 
GGCAAGACCG CCGCCGCATT GAAGCTGGCC GAGCGCTGGC CGGTCGAGAT CATCAGCATG
GATTCCGCGC TGGTGTATCG CGGCATGGAC ATCGGCACCG CCAAGCCCAG CGCCGAAGAA
CAAGCCATCG CGCCGCATCA CCTGATCGAC ATCATTGATC CGCTCGATGC CTACTCCGCC
GCGCAGTTTG CCAATGATGC GAACGCGCTG ATCGATGCCA TCCGCGCACG CGGCAAGCTG
CCGCTGATCG TCGGCGGCAC GATGCTGTAT TACAAGGCGC TCACGCAAGG GCTCTCCGAT
TTGCCCGGCG CCGACCCTGC CATCCGCGCG GAGATCGATG CCGAAGCGGC ACGCGATGGC
TGGCCCGCGC TACACGCGAA ACTCGCACTG GTCGACCCGG TGACGGCCGC GCGATTGCAC
ACAACCGACG CGCAGCGCAT CCAGCGCGCG CTGGAGCTGT ATCGTCTGAC CGGTCAGCCG
ATGTCCGCCC TGCTCGCACG CGAGGTCGGC GCGAATGCGT TCCAGCAGCA CGATGCGGCT
GCGCCGTATC TGACGATCGC GCTGGAACCG TCCGACCGCC TCGTGCTGCA CGCGCGCATC
GCACAGCGCT TCGATGCGAT GCTCGCCGGC GGCCTGCTCG ACGAAGTGGA GGGCTTGCGC
CGCCGCGGCG ATCTTTCGCC CACGCTGCCG TCCATCCGTT GCGTCGGTTA CCGCCAGGCA
TGGGCTTACC TGGAAGGCGA AATCGACATG GCTGCCCTGC GCGAACAAGG CATCGCCGCA
ACCCGCCAGC TCTGCAAGCG CCAGATCACC TGGCTGCGCA GCACGCCGGA GCGGCACGTG
GTCGATTGCC TCGCGCCCGA TTACGTCGAC CAGGTCGCGC GCCTGGTCCA AACCTCACTG
GAATCGCAAT CCCAATGA
 
Protein sequence
MIASAASAPR AICLLGPTAS GKTAAALKLA ERWPVEIISM DSALVYRGMD IGTAKPSAEE 
QAIAPHHLID IIDPLDAYSA AQFANDANAL IDAIRARGKL PLIVGGTMLY YKALTQGLSD
LPGADPAIRA EIDAEAARDG WPALHAKLAL VDPVTAARLH TTDAQRIQRA LELYRLTGQP
MSALLAREVG ANAFQQHDAA APYLTIALEP SDRLVLHARI AQRFDAMLAG GLLDEVEGLR
RRGDLSPTLP SIRCVGYRQA WAYLEGEIDM AALREQGIAA TRQLCKRQIT WLRSTPERHV
VDCLAPDYVD QVARLVQTSL ESQSQ