| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2835 |
|---|
| Symbol | |
|---|
| ID | 6287244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2943366 |
|---|
| End bp | 2944013 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642626405 |
|---|
| Product | SNARE associated Golgi protein |
|---|
| Protein accession | YP_001900390 |
|---|
| Protein GI | 187929903 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.691658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGG TCGACATCGT GCTGCATGTC GACAAGTCGT TGGGCTTGCT GATTCAGCAA
TACGGCGCGT GGGTCTACGT GCTGCTGTTC GCCATCGTGT TTGCCGAAAC CGGGCTCGTG
GTGCTGCCTT TTCTGCCGGG CGACACCCTG CTGTTCATTG CCGGCGCCAT GTGCGCCACC
GGCCAGATGG ACGCCTGGCT GCTCATCGTG CTGCTGGTGA TTGCCGCGAC GACGGGCAAC
ACGGTCAACT ATTTCGTCGG CTCCTGGATC GGCCCCAAGG TATTCGACGG TCACATCCGC
TTCCTTGATC ACCAAGCGCT GCTCAGGACC CACACCTTTT ACGAACGCCA CGGCGGCAAG
ACGCTCGTGA TGGCGCGCTT CATCCCGGTG GTGCGGACGT TCGCGCCGTT TGTGGCGGGC
GTGTCGAAGA TGACGTTCGC GAAGTTCCAG CTCTTCAACA TGATCGGCGC GGTGCTGTGG
GTGGCGATCC TTGTGCTGTC GGGCGAGGCG TTCGGCAATG TGCCCGTGAT TCGCGATCAC
CTGAACACGA TCGTGCTGAT TGGCCTGGGC GCGGCGATTG TGCCGCTAAT GCTCGGCGGG
CTGTGGAAGT TGCTCAAACG CCGTCGCGGC GCCGTCGCGC AGAAGTAA
|
|---|
| Protein sequence | MQLVDIVLHV DKSLGLLIQQ YGAWVYVLLF AIVFAETGLV VLPFLPGDTL LFIAGAMCAT
GQMDAWLLIV LLVIAATTGN TVNYFVGSWI GPKVFDGHIR FLDHQALLRT HTFYERHGGK
TLVMARFIPV VRTFAPFVAG VSKMTFAKFQ LFNMIGAVLW VAILVLSGEA FGNVPVIRDH
LNTIVLIGLG AAIVPLMLGG LWKLLKRRRG AVAQK
|
|---|
| |