Gene Rpic_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2825 
Symbol 
ID6289172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2932500 
End bp2934887 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content66% 
IMG OID642626395 
Productpeptidase S45 penicillin amidase 
Protein accessionYP_001900380 
Protein GI187929893 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.572731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGAT TCATGCAGGG ATGCGCACTG CGCAGCGCGC TTGCCGTGGC CGCACTTGCG 
GCGCTGGCCG GCTGCGCAAG CACCGACAGT GGCTGGGCCA CGCCCGCGGA CACCGGCATC
TCGGCTGAAA TCAGCCGCAC CCGCTTCGGC ATTCCGCACG TCCGTGCCAA CGACTACGCC
AGCCTCGGCT TCGGCATGGC CTATGCCTAT GCACAGGACA ATGTCTGCCT GCTGGCCGAC
CAGATCGTCA CCGTCCACGG CGAGCGCTCG AAGACGTTCG GGCCGGACGG CACGGTCGTG
GTGTCGTTCA AGTCGGTGCC GAACACCCAA GCCGACGCCT TCTTCAAGAG CGCATTCGAC
GAGGCTGGCC TGCGCGCCGG CTATGCGCAG ATGTCGCCTG AAGCGCGCGA GCTGCTGCGT
GGCTACATCG CGGGCTACAA CCGCTATCTG AAAGACACGC CGGCCGCCAA CCGCCCAGCC
GCCTGCCGCA ATGCCGACTG GGTGCGTCCG CTCACGGTAG CCGACATGAT GCTGATGGGC
GAAGAAAAAG CCATCCAGGC GAGCGCAGGT GCCATGCTGG CGAGCATCGT CGCCGCGCGG
CCCCCGGGCG GCGCCCCTGC ATCGGCGGTC ATTCCACCCC ATGCCGTCGA CATCGCTGCA
CTCGACCGCG ACCTGCAACT GCGCGATATG CCGATCGGCT CCAACGGCTG GGCCTTCGGC
AAGGACGCCA CGGATAACGG CCGCGGTGTG CTGCTCGGCA ACCCGCACTT CCCATGGACG
ACCACCAACC GCTTCTACCA GGTCCACCTG ACCGTGCCTG GCAAGCTGGA CGTGATGGGC
GCGTCGATTG CCGCGTTCCC CGTCGTCAGC ATCGGCTTCA ACAAAGACGT GGCGTGGACG
CATACCGTCT CCACCGGCCG CCGCTTCACG CTGTTCGAGC TGAAGCTGGC CGAAGGCGAC
CCGACCACCT ACCTGATTGA CGGCAAGCCG CACAAGATGA CCACGCGCAC CGTGGCTTTT
GACGTGAAGC TGCCGGACGG CCGCATCGAG CGCCGCACGC ACACCTTCTA CAACACGGTG
TACGGCCCCG TGCTGTCGAT GCCCGCCGGT GGCATGCCGT GGACCTCGCA GAAGGCCTAC
ACGCTGCGCG ACGCCAATCG CAACAACACG CGCTCCATCG ATACTTGGCT GCATATCGCA
CAGGCCAAGG ACGTGGCGGG CATCCAGCAG GCGATCGGCA ACCTCGGCAT CCCCTGGGTG
AACACGATCG CCACCGACCG AAACGGCCGT GCGCTGTTTG CCGATGTGTC GACCACGCCG
GACGTGTCGG CTGAAGCGCT CAAGCGTTGC GCGCCGTCGC CGCTCGCAGA CAAGCTCTTC
AAGGGCGCGG GGCTGGTGCT GCTCGACGGC TCACGCAGTG CGTGCGACTG GCAGGTCGAT
CCGGCCTCGC CCGTGCCGGG CCTGGTGGCG CCCGCGCGCA TGCCGGTACT GGAGCGGGAA
GACTACGTCG CCAACAGCAA CGACAGCTCG TGGCTGACCA ACCCAGCGCA GAAGCTGACC
GGCTTCTCGC CGGTGATGGG CTCGACCGAC GTGCCGCAGC GCCTGCGCAC ACGCATCGGC
ATCATCGAAA TCGAACGTCG CCTGAACGGC ACTGACGGGC TGCCCGGCAA CAAGGTCAAC
CTACCGAACC TGCAGGCGAT GATCTTCCGC GACGCCAACC TCGCCGGCCA CCTCGTGCAC
GACGATCTCC TGGCCGCCTG CAAAGGCACG TCCGATCTCT ACACCGATGT ACGCGACGGC
TGCGCCGCCC TGGCGCAATG GAACCTCACG GACAACGTCG ACGCACGCGC TGCGCACCTG
TTCCGCGAGT TCTGGATGCG CGCCAAGGAC ATCCCGCACG TCCATGCGAT CGACTTCAAC
CCGGCTGATC CGGTCCACAC GCCGCGCAGC CTGCGCATGA GCGATGCAGC CGTGCGCACG
GCCGTGTTCA AAGCATTGAA GGATGCCGTG GGCGCGGTTC GCACCGCCGG CTTTGCGCTG
GATGCGCCGC TGGGCACTGT GCAGGCGGCA CACGCGCCGG GCGACAACAT CACCCTGCAC
GGCGGCGAGG AATACGAGGG CGTGCTGAAC AAGCTGCAGA GCACGCCGAT CGGGCCGAAG
GGCCTGCAGG TGTATTTCGG CACGAGCTAC ATCCAGACTG TCACGTTCGA CGATCAGGGC
CCGGTGGCCG ATGCGCTTCT GACCTACGGT GAATCGACCG ATCCGGCTTC ACCGCATGCG
TTCGACCAGA TGCGCGAATT CTCGGCCAAG CGCTGGAACC GGCTACCGTT CTCGGAAGCC
GCCATCGCCG CCGATCCAGC ACTGAAGGTG ACGAAGTTGT CGCAGTAA
 
Protein sequence
MQRFMQGCAL RSALAVAALA ALAGCASTDS GWATPADTGI SAEISRTRFG IPHVRANDYA 
SLGFGMAYAY AQDNVCLLAD QIVTVHGERS KTFGPDGTVV VSFKSVPNTQ ADAFFKSAFD
EAGLRAGYAQ MSPEARELLR GYIAGYNRYL KDTPAANRPA ACRNADWVRP LTVADMMLMG
EEKAIQASAG AMLASIVAAR PPGGAPASAV IPPHAVDIAA LDRDLQLRDM PIGSNGWAFG
KDATDNGRGV LLGNPHFPWT TTNRFYQVHL TVPGKLDVMG ASIAAFPVVS IGFNKDVAWT
HTVSTGRRFT LFELKLAEGD PTTYLIDGKP HKMTTRTVAF DVKLPDGRIE RRTHTFYNTV
YGPVLSMPAG GMPWTSQKAY TLRDANRNNT RSIDTWLHIA QAKDVAGIQQ AIGNLGIPWV
NTIATDRNGR ALFADVSTTP DVSAEALKRC APSPLADKLF KGAGLVLLDG SRSACDWQVD
PASPVPGLVA PARMPVLERE DYVANSNDSS WLTNPAQKLT GFSPVMGSTD VPQRLRTRIG
IIEIERRLNG TDGLPGNKVN LPNLQAMIFR DANLAGHLVH DDLLAACKGT SDLYTDVRDG
CAALAQWNLT DNVDARAAHL FREFWMRAKD IPHVHAIDFN PADPVHTPRS LRMSDAAVRT
AVFKALKDAV GAVRTAGFAL DAPLGTVQAA HAPGDNITLH GGEEYEGVLN KLQSTPIGPK
GLQVYFGTSY IQTVTFDDQG PVADALLTYG ESTDPASPHA FDQMREFSAK RWNRLPFSEA
AIAADPALKV TKLSQ