| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2824 |
|---|
| Symbol | |
|---|
| ID | 6289171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2931323 |
|---|
| End bp | 2932339 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642626394 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_001900379 |
|---|
| Protein GI | 187929892 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.60964 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAA TCGACCTGCT GACCTTTCCC GACGCGGGCT TTTCCACACT GGCAACGGCT
GCCGACACGC TTGGCGTGGC CAATGCGCTG GCTTCCATGC AGGCCGGCAA GCGCGCCAAT
GCCGCCAAGA CGCCGATGTT CGGCTGGCGA CTCATCGCGC GGGACCCGGC GCATTGGCAG
GCTGCGGCAC AAACGCTCGC TTGCCGTTGT GATGCACTAC CGGATGACGA CGCGCAGCTC
GGTGATGCGT TGATTGTCCC GCCCGTGCAT TTCGACCACA TTGGCACGCT GGAACAGCGC
CTGGCTCTCC TGGAAGTGGA GCGCGCCACC ATCCGCCGTT ATCTGCAGGC CGGGCGGTTG
GTGGCGTCGC CGTTCACGGG TGTGGCGATG CTGGCTGACG TGCTGCCGCC CGGGCAGCGC
CTGACCGTCA CGTGGCTGAT TGCCGGGTGG GTGCAGGGCA ATTTCCCCAG CCTGAAGGTG
GTGCCTGCAC AGGCGATTGT CAGCAGCGGC AACGTCATCA CCGCACGGGC GATGGAGCAT
GGCGTGGCGC TCACGCACCG CTTAGTCGCG CGATTGGCGG ATGCGCGGCT CGCGCGCACG
CTGGGCAATA CGGCGCTCGA TCACCCCTCG CGCGGCGAGG CGATCGGCAT CTGGCTGCGC
AGCAAGCCGG CCATCCGCGA CAGCGTCGTG CTGCGCGCGC GGCGTTACCT GCAGCAGCAT
CTGCACGACC CGTTTGATCT GGAAAAACTC GCAGCCGCCG CCTCGACCAG CGAGCGGACG
CTGCTGCGGC ATTTCGCGAA AACGGTGGGG ATGTCGCCGC TGCAATTGCT GCACCGGTTG
CGCGTGGAGC GCGCGTGTCA CTTGCTCGAA GTCAGCACGC TGAGCCTGAC GGCGATTGCC
GAGCAGTGCG GCTATCAGGA CATGTCCGCC TTCCGGCGGT TGATCCGGCG GCACACGGGG
CGGCCGCCGG GGGCACATCG GCGCGCGCAT TCGGTGCGCG CCGAACTGCG AAATTAA
|
|---|
| Protein sequence | MPKIDLLTFP DAGFSTLATA ADTLGVANAL ASMQAGKRAN AAKTPMFGWR LIARDPAHWQ
AAAQTLACRC DALPDDDAQL GDALIVPPVH FDHIGTLEQR LALLEVERAT IRRYLQAGRL
VASPFTGVAM LADVLPPGQR LTVTWLIAGW VQGNFPSLKV VPAQAIVSSG NVITARAMEH
GVALTHRLVA RLADARLART LGNTALDHPS RGEAIGIWLR SKPAIRDSVV LRARRYLQQH
LHDPFDLEKL AAAASTSERT LLRHFAKTVG MSPLQLLHRL RVERACHLLE VSTLSLTAIA
EQCGYQDMSA FRRLIRRHTG RPPGAHRRAH SVRAELRN
|
|---|
| |