Gene Rpic_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2815 
Symbol 
ID6286347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2923363 
End bp2924883 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content67% 
IMG OID642626386 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001900371 
Protein GI187929884 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCA AGCATCTGCC GACCGACCAT CCGGATGATC CCAACCTGCC GAGCCAGGCC 
CGCCGCCAAT GGCTCACGCG CATGGCGAAG GCCGGCGCAG GCACGGTCAT CCTGAGCCTG
GTGGGCCCGC AGATTGCGCG CGGCGCCAAC ATCGTCGCCG TGCGCGTGTG GCCCGCCGAG
GACTACACAC GCGTGACGAT CGAATCCGAC GTCGCGCTCA AGGCCACGCA TCAGCTCATC
AAGGATCCGG ATCGCCTGAT GGTCGATATC GACGGGCTCG AGCTGAACCC GACGTTGCGC
GAGCTGGTGG CCAAGATCGC GCCGAACGAT CCGTACATCC GCCAGGTGCG CGTGGGTCAG
AACCGGCCGA GCGTCGTACG CCTGGTGTTC GACCTGAAGG AAAGCGTCAA CCCGCAGGTG
TTCACGCTGC TGCCGATTGC CGGCTATCGC AACCGGCTGG TGTTCGACCT GTACCCGACC
AACCCGCCCG ACCCGCTGAT GCAGCTCGTG CAGGCCACCG AGGGCAAGCA GGAGCGCTTT
GCCGCGTCGG GCGGCACGCC GATGCCGACA CCGGATGACG ATGACCCCAT CGCTGCGCTG
GCACGCCGCA GCAGCGGCGG CAGCCCAAAC AAGCCGCCGA TCGAAGAGCC GCACCTCCCG
GCGCTTGCCA ACCGCACGCC GCCGCGCAAG GTGCCGCCGA CGACCTCTTC GAATCCTCCG
TCGACGCTCG CCAACGCGCC GAACACGCCG CCGCTGGAGA TCATTCCCGA GCCACCCGTG
CCGCGTGCAC CCTCGAACGG CCCGCGCATG CGCCGCCTGC TCACGGTCGC CATCGACCCC
GGCCATGGCG GCGAAGACCC GGGCGCCACG GGCGGTGCCG GCACGCACGA GAAAGACGTG
GTGCTGTCGA TCGCCCGCAT GCTCAAGGCC AAGATCGACG CCCAGCCCAA CATGCGCGCC
ATGATGACGC GCGATTCCGA CTACTTCGTC CCGCTGGGCG TGCGCGTGCA GAAGGCGCGC
CGCGTGCAGG CGGATCTGTT TGTCTCCATC CATGCCGATG CGTTTCTTTC GCCGGAAGCG
CGCGGGGCAT CAGTGTTCGT GTTGTCCGAT CGTGGCGCTT CGAGCGCGCA GGCCAAGTGG
CTCGCCAACA AGGAAAACGC TGCCGACATG ATCGGCGGCG CGAACCTCGG CTCGAAGGAC
GCGCAGGTCA CGCGCGTGCT GCTGGACCTG TCGACCACCG CGCAGATCAC CGACAGCATG
AGGGTCGGCA AGGCCGTGCT GGACCAGATC GGCGGCATCA ACCGGCTGCA CAAGGGGCAG
GTGGAGCAGG CGGGCTTTGC GGTGCTCAAG GCGCCCGACA TTCCGTCGAT CCTCGTCGAG
ACGGCCTTCA TCTCCAACCC GGAAGAAGAA GCCAAGCTCA ACGACCTGGG CCACCAGAAC
CAGCTTGCCG ACGCCATCCT GCGCGGCATT CGCGCCTACT TTGCCAAGAA CCCGCCGTTG
TCGCGCAACC CGGGCGTCTG A
 
Protein sequence
MLIKHLPTDH PDDPNLPSQA RRQWLTRMAK AGAGTVILSL VGPQIARGAN IVAVRVWPAE 
DYTRVTIESD VALKATHQLI KDPDRLMVDI DGLELNPTLR ELVAKIAPND PYIRQVRVGQ
NRPSVVRLVF DLKESVNPQV FTLLPIAGYR NRLVFDLYPT NPPDPLMQLV QATEGKQERF
AASGGTPMPT PDDDDPIAAL ARRSSGGSPN KPPIEEPHLP ALANRTPPRK VPPTTSSNPP
STLANAPNTP PLEIIPEPPV PRAPSNGPRM RRLLTVAIDP GHGGEDPGAT GGAGTHEKDV
VLSIARMLKA KIDAQPNMRA MMTRDSDYFV PLGVRVQKAR RVQADLFVSI HADAFLSPEA
RGASVFVLSD RGASSAQAKW LANKENAADM IGGANLGSKD AQVTRVLLDL STTAQITDSM
RVGKAVLDQI GGINRLHKGQ VEQAGFAVLK APDIPSILVE TAFISNPEEE AKLNDLGHQN
QLADAILRGI RAYFAKNPPL SRNPGV