Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2815 |
Symbol | |
ID | 6286347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2923363 |
End bp | 2924883 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642626386 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001900371 |
Protein GI | 187929884 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCA AGCATCTGCC GACCGACCAT CCGGATGATC CCAACCTGCC GAGCCAGGCC CGCCGCCAAT GGCTCACGCG CATGGCGAAG GCCGGCGCAG GCACGGTCAT CCTGAGCCTG GTGGGCCCGC AGATTGCGCG CGGCGCCAAC ATCGTCGCCG TGCGCGTGTG GCCCGCCGAG GACTACACAC GCGTGACGAT CGAATCCGAC GTCGCGCTCA AGGCCACGCA TCAGCTCATC AAGGATCCGG ATCGCCTGAT GGTCGATATC GACGGGCTCG AGCTGAACCC GACGTTGCGC GAGCTGGTGG CCAAGATCGC GCCGAACGAT CCGTACATCC GCCAGGTGCG CGTGGGTCAG AACCGGCCGA GCGTCGTACG CCTGGTGTTC GACCTGAAGG AAAGCGTCAA CCCGCAGGTG TTCACGCTGC TGCCGATTGC CGGCTATCGC AACCGGCTGG TGTTCGACCT GTACCCGACC AACCCGCCCG ACCCGCTGAT GCAGCTCGTG CAGGCCACCG AGGGCAAGCA GGAGCGCTTT GCCGCGTCGG GCGGCACGCC GATGCCGACA CCGGATGACG ATGACCCCAT CGCTGCGCTG GCACGCCGCA GCAGCGGCGG CAGCCCAAAC AAGCCGCCGA TCGAAGAGCC GCACCTCCCG GCGCTTGCCA ACCGCACGCC GCCGCGCAAG GTGCCGCCGA CGACCTCTTC GAATCCTCCG TCGACGCTCG CCAACGCGCC GAACACGCCG CCGCTGGAGA TCATTCCCGA GCCACCCGTG CCGCGTGCAC CCTCGAACGG CCCGCGCATG CGCCGCCTGC TCACGGTCGC CATCGACCCC GGCCATGGCG GCGAAGACCC GGGCGCCACG GGCGGTGCCG GCACGCACGA GAAAGACGTG GTGCTGTCGA TCGCCCGCAT GCTCAAGGCC AAGATCGACG CCCAGCCCAA CATGCGCGCC ATGATGACGC GCGATTCCGA CTACTTCGTC CCGCTGGGCG TGCGCGTGCA GAAGGCGCGC CGCGTGCAGG CGGATCTGTT TGTCTCCATC CATGCCGATG CGTTTCTTTC GCCGGAAGCG CGCGGGGCAT CAGTGTTCGT GTTGTCCGAT CGTGGCGCTT CGAGCGCGCA GGCCAAGTGG CTCGCCAACA AGGAAAACGC TGCCGACATG ATCGGCGGCG CGAACCTCGG CTCGAAGGAC GCGCAGGTCA CGCGCGTGCT GCTGGACCTG TCGACCACCG CGCAGATCAC CGACAGCATG AGGGTCGGCA AGGCCGTGCT GGACCAGATC GGCGGCATCA ACCGGCTGCA CAAGGGGCAG GTGGAGCAGG CGGGCTTTGC GGTGCTCAAG GCGCCCGACA TTCCGTCGAT CCTCGTCGAG ACGGCCTTCA TCTCCAACCC GGAAGAAGAA GCCAAGCTCA ACGACCTGGG CCACCAGAAC CAGCTTGCCG ACGCCATCCT GCGCGGCATT CGCGCCTACT TTGCCAAGAA CCCGCCGTTG TCGCGCAACC CGGGCGTCTG A
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Protein sequence | MLIKHLPTDH PDDPNLPSQA RRQWLTRMAK AGAGTVILSL VGPQIARGAN IVAVRVWPAE DYTRVTIESD VALKATHQLI KDPDRLMVDI DGLELNPTLR ELVAKIAPND PYIRQVRVGQ NRPSVVRLVF DLKESVNPQV FTLLPIAGYR NRLVFDLYPT NPPDPLMQLV QATEGKQERF AASGGTPMPT PDDDDPIAAL ARRSSGGSPN KPPIEEPHLP ALANRTPPRK VPPTTSSNPP STLANAPNTP PLEIIPEPPV PRAPSNGPRM RRLLTVAIDP GHGGEDPGAT GGAGTHEKDV VLSIARMLKA KIDAQPNMRA MMTRDSDYFV PLGVRVQKAR RVQADLFVSI HADAFLSPEA RGASVFVLSD RGASSAQAKW LANKENAADM IGGANLGSKD AQVTRVLLDL STTAQITDSM RVGKAVLDQI GGINRLHKGQ VEQAGFAVLK APDIPSILVE TAFISNPEEE AKLNDLGHQN QLADAILRGI RAYFAKNPPL SRNPGV
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