Gene Rpic_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2798 
Symbol 
ID6286667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2908008 
End bp2908772 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID642626369 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001900354 
Protein GI187929867 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAATC GTCGTCAGTT CATGCATTCG ATGCTGGCTT GTGCCGTGGC GTTGTCCGCT 
GCGGCGTCCT TCGCAACCGC TGCGCACGCT GCTGGGGAGC CGTTGCGGGT GGCTACCGAC
GCCACGTTCG CGCCGATGGA GTTTGTCGAA AACGGCAAGC GCACCGGCTT TGATGTGGAC
CTGATCGATG CGCTGGCCCG CACCCTGGGC CGCCCGGTCG AGTGGACCGA CATCGACTTC
AAGGGCCTCG TGCCGGGCCT GATCTCGCGC CGCTTCGACG TGGCCATTTC GGGCATCTAC
ATCACGGAAG AGCGCAAGAA GGTGGTGGAC TTCACGGTGC CGTACTACCA CGGCGGCCTG
GTCGCGCTGG TCAAGCAAGG CAACACGGCC ATCAAGACGC CGGCGGATCT GAACGGCAAG
AAGGTCAGCG TGCAGGTGGG CACCAAATCG GTCAACTACC TGCGCGAGAA CTACCCGAAG
GTCGAACGCG TGGAAGTCGA GAAGAACAAC GAGATGTTCA ACCTCGTCGA GATCGGCCGG
GCCGATGCCG CTGTCACAGG CCGCCCCGCC GCCGCGTACT ACGTGAAGGC GCGTCCGGGC
CTGCGCCTGG TTGAGCCGGC ACTCACCACC GAGGAATACG GCATCGCCGT GCGTCGCGAT
CAGCCCGAAT TGACCAAGGC ACTGAACGCC GCGCTGGAGA AGATCAAGGC GGACGGCACG
TACGACCAGA TCGTCAAGAA GTGGTTTGGC ACCACCGCGA AGTAA
 
Protein sequence
MGNRRQFMHS MLACAVALSA AASFATAAHA AGEPLRVATD ATFAPMEFVE NGKRTGFDVD 
LIDALARTLG RPVEWTDIDF KGLVPGLISR RFDVAISGIY ITEERKKVVD FTVPYYHGGL
VALVKQGNTA IKTPADLNGK KVSVQVGTKS VNYLRENYPK VERVEVEKNN EMFNLVEIGR
ADAAVTGRPA AAYYVKARPG LRLVEPALTT EEYGIAVRRD QPELTKALNA ALEKIKADGT
YDQIVKKWFG TTAK