Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2791 |
Symbol | |
ID | 6286485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2902171 |
End bp | 2903502 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642626362 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001900347 |
Protein GI | 187929860 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCA CGGCAGCGCC CACCCACGGC GATGGGGCAC CGGCACCCGC CATCACTGCG GCCACCCGAC GCAAGGCCAT CATCGCCGCC ACCATCGGCA ACGGCCTCGA ATGGTTCGAC TTCACGGTCT ACAGCTTTTT CGCCGTCATC ATCGCCAAGC TGTTCTTCCC CACCGGCAAC GACTTCACCT CGTTCATGCT CACGGTCGCC ACGTTCGGCG TGGGATTCTT CATGCGCCCC GTCGGCGCTG TCGTCCTTGG CATCTATGCG GACCGCGTGG GCCGCAAGGC TGCGCTCACG CTCACCATCA TGCTGATGGC GATCGGCACG GCCATCATCG GCCTTGCACC GACGTACGCG CAGATCGGTA TCGGCGCGCC CATCCTCATC GTGATCGCGC GGCTCATCCA GGGCTTCTCG GCGGGCGGAG AGGTCGGTGG CGCCACGGCG TTCCTGATCG AGTATTCACC GGACGAACGG CGCGGCTACT TCGCAAGCTG GCAGCAGGCG AGCCAGGGCA TCTCGTTCAT CCTGGGCGCC GCCATGGGTG CGATCGTCAC GAACGGTCTG TCGCCGGAGC AGATCGATGC GTGGGGCTGG CGCATTCCGT TCCTGTTCGG CCTGTTGATC GGGCCGGTCG GCATGTACAT CCGCTCGCAC CTGCACGAGC CGCCCGCCTT CGCAGCGCAG AAGGCAAAGG CGGCAAAGGA GTCGCGTCTG GCACCGCTGT CGCAAGTGCT GCGCGATCAT CCGCGCGAGG TGCTGGGTGG CCTGGGCGTG ACGATTCTCT GGACCGTCTG CACCTACACG CTGGTGTTCT ACATGCCGAC GTATGCAAAG CAACAGCTGG GGCTGCCCCT GGGCGCGACG TTCCAGTCGA CGGCGCTTTG CGGCGCGATC ATCTTCGTGC TGTGCCCACT CATGGGAACG CTGTCCGATC GCATCGGTCG CAAGCGCATG CTGGGCACGG TGGCGCTTGT CATCGCAGCA GCGGCGTATC CGCTCTTCCA CTGGCTCAAC GTCAACCCGA CGGTGCAGAC GCTGCTGCAG GTGCAGGTGA TCCTGGGTGT GTTGCTGGCG GCGTTTACGG GTCCGGCGCC GGCCGTGCTG GCCGAGCAGT TTCCGACGGC GGTACGCTCC ACCGGCCTGT CGATTTCGTA CAACCTGGCG GTCACCATCT TCGGTGGTTT TGCCCCGCTG ATCGTGACGT GGTTGATTGC CAGCTCGGGC AGCAAGCTCG CACCGTCGTA CTACGTGATG GCCGCTGCCA TCATCAGCGT GTTTGCGCTG GCGCTGATGC ACGACCGCAC GGGCAAGCCG ATCGAAAAAT GA
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Protein sequence | MQATAAPTHG DGAPAPAITA ATRRKAIIAA TIGNGLEWFD FTVYSFFAVI IAKLFFPTGN DFTSFMLTVA TFGVGFFMRP VGAVVLGIYA DRVGRKAALT LTIMLMAIGT AIIGLAPTYA QIGIGAPILI VIARLIQGFS AGGEVGGATA FLIEYSPDER RGYFASWQQA SQGISFILGA AMGAIVTNGL SPEQIDAWGW RIPFLFGLLI GPVGMYIRSH LHEPPAFAAQ KAKAAKESRL APLSQVLRDH PREVLGGLGV TILWTVCTYT LVFYMPTYAK QQLGLPLGAT FQSTALCGAI IFVLCPLMGT LSDRIGRKRM LGTVALVIAA AAYPLFHWLN VNPTVQTLLQ VQVILGVLLA AFTGPAPAVL AEQFPTAVRS TGLSISYNLA VTIFGGFAPL IVTWLIASSG SKLAPSYYVM AAAIISVFAL ALMHDRTGKP IEK
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