Gene Rpic_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2762 
Symbol 
ID6286944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2873489 
End bp2874547 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content58% 
IMG OID642626333 
ProductISXo7 transposase 
Protein accessionYP_001900318 
Protein GI187929831 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.430207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAA AGTTCATGGA AAAAGAAGAT GCACGCAAGC AGTCGCGGGA AGTACTGCAT 
GAGCGTCGCA AGCAGGTCAT CCGCTTGCAT CGAAAAGGTG TTGGCGTGAT GCAGATCGTT
GAGCAAACTG GGCTCAGTTG GTCTGGGGTC AACACTGCAC TGCGCCTGTT CGAGCAAGGC
GGGGCGGCTG CACTCAAGCC TAACGCCAGG GGAAAGAAGC TGGGCAGTGG ACGCAGCCTG
AGCGCTGAGC AAGAGCGCGT CATTCGAATG ACCATCATCG ACAAGCGCCC AGAGCAGATC
AAGATGGAGT TCGCCCTTTG GAGTCGGCCC GCAGTGCGCG AACTCATCGA ACGCGACCTG
GGGCTCAAGC TATCCGTGCG GGCGGTGGGC GACTATCTGG CGCGCTGGGG TTTTACGCCG
CAAAAGCCGA TCAAAAAAGC CTACGAGCAG AGGCCTGAGG CCGTCCAGGC CTGGCTCGAA
GATGAATACC CCGCCATCGA GGCCAGGGCC AAGCGTGAAG GCGCAGAGAT CCATTGGGGT
GATGAAACGG CCTTGGTCAA CACAGATGTG CGTGGCAGAA GTTATGCACC AGCAGGCCAG
ACGCCGGTGA CGCGGGCAGT GGGTGGCACA CGGCAAAAAC TCTCCATGAT TGCCACCGTC
ACAAACCAGG GCAAAACGCG CTGGATGATC ATTGACGAGG CGTTCAATTC AGACAAACTG
ATCGAGTTCA TGCAGGCCTT GATCAAGGAG TCACAGGGCA AGAAGATATT CCTGATTCTG
GACAACCTGA GGGTGCACCA CAGCAAGCCT GTCAAGGAGT GGTCGGCCCA GCGCAAAGAG
GACATTGAGT TGTTCTACCT GCCCAGCTAT AGCCCCGAAC TCAACCCAGA GGAGCGGCTC
AATGCCGATT TGAAGCATGC GATTGGCAGC AAGGTTCCGG TGCGAACCAA GGCCAAGCTG
CGCGCGGCGG CGACAGAACA CATGACGATG TTGGAGAACA CGCCAGAGCG GGTCCGGAAG
TACTTTGGCG ACAAGCATGT CGCCTATGCG GCCTCATGA
 
Protein sequence
MTPKFMEKED ARKQSREVLH ERRKQVIRLH RKGVGVMQIV EQTGLSWSGV NTALRLFEQG 
GAAALKPNAR GKKLGSGRSL SAEQERVIRM TIIDKRPEQI KMEFALWSRP AVRELIERDL
GLKLSVRAVG DYLARWGFTP QKPIKKAYEQ RPEAVQAWLE DEYPAIEARA KREGAEIHWG
DETALVNTDV RGRSYAPAGQ TPVTRAVGGT RQKLSMIATV TNQGKTRWMI IDEAFNSDKL
IEFMQALIKE SQGKKIFLIL DNLRVHHSKP VKEWSAQRKE DIELFYLPSY SPELNPEERL
NADLKHAIGS KVPVRTKAKL RAAATEHMTM LENTPERVRK YFGDKHVAYA AS