Gene Rpic_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2758 
Symbol 
ID6288122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2870018 
End bp2870983 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID642626329 
Productbeta-lactamase domain protein 
Protein accessionYP_001900314 
Protein GI187929827 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.332048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGTT TCGACAACAA CCGTCGCCGC TGGATGCGGC AGGCCGGCGC GCTGGCCGTG 
GGTGCGGGCG CGGCGTCGGC AGGTCTGCCG CTTGGCGCCT TGGCCGCCGA TGCACCCAAG
AAGGGCACGC GGTTGATCTT GCTGGGCACG GCGGGCGGGC CGACGCCGAA GAAGAATCGC
TCGGCGCCGG CACAGGTGAT CGTCATCAAC GGCGTGTCGT ACGTGGTCGA TTGCGGCAAC
GGTGTCGCAC GCCAGTATGT GACGGCGGGC CTCAAGCTCA AGGACATCCG CCACGTCTTC
ATCACGCATC AGCACTCCGA TCACAACGCC GATTACGGCA CGCTGATGCT GCTCGCCTGG
GCCACCGACC TGACCGGCCC CGTCGACGCC TGGGGCCCGC CCCCGCTGGC CGCAATGACG
ACCAAGTTCC TTGAGCTGTA CGACTACGAC ATCCGCACCC GCATTGCCGA TGAAGGCCGC
CCGCCGCTGG CGCCGATGCT TCATCCGCAC GAGCTGACCG AGGGCGGCCT CGTCATGCAG
GATGCCAACG TGAAGGTGAC GAGCGCGCTG GTCAAGCACC CACCGGTCTC GCCGGCATTC
GCGTTTCGCT TCGATTCGGC AGACCGCTCC ATCGTCATCT CCGGCGATAC GGCGCCGAGC
GAAAACCTCG TGCGCCTGGC ATACGGCGCC GATGTGCTTG TGCACGAGGT GATGCACCTG
CCGTCGCTCG ACAAGCTGCT GTCCACCGAG CCCAACGCCA AGACGCTGCG CGAGCATCTG
CTGGCGAGCC ACACCTCCAC CGAAGAGGTC GGCCGCATTG CCACCGAGGC CAAGGTGAAG
ACACTGGTGC TGTCGCACTT CGTGCCCGGC GGCTATCCGT ATCTGGAAGA TTCAGTCTGG
CTGGATGCCG TGCGCCCGCA CTTCAAGGGC GAGATCATCG TCGGGCGCGA TCTGCAGGAA
ATTTAA
 
Protein sequence
MHGFDNNRRR WMRQAGALAV GAGAASAGLP LGALAADAPK KGTRLILLGT AGGPTPKKNR 
SAPAQVIVIN GVSYVVDCGN GVARQYVTAG LKLKDIRHVF ITHQHSDHNA DYGTLMLLAW
ATDLTGPVDA WGPPPLAAMT TKFLELYDYD IRTRIADEGR PPLAPMLHPH ELTEGGLVMQ
DANVKVTSAL VKHPPVSPAF AFRFDSADRS IVISGDTAPS ENLVRLAYGA DVLVHEVMHL
PSLDKLLSTE PNAKTLREHL LASHTSTEEV GRIATEAKVK TLVLSHFVPG GYPYLEDSVW
LDAVRPHFKG EIIVGRDLQE I