Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2751 |
Symbol | |
ID | 6287966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2862478 |
End bp | 2863725 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626322 |
Product | integrase family protein |
Protein accession | YP_001900307 |
Protein GI | 187929820 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.606598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCACT TCAACTACAA GCTGACGCCC ACCCGTATCA ACAACGCTAA GCCCAAGGAA CAGCCCTACA AGCTCACGGA CGGCGGCGGC CTGTTTGTCC TGGTGCACCC GGGCGGCTCG AAGGCCTGGC GCTACCAATA CATGCTCTCG GGCAAGCGCC GATCGGTGCT GATCGGGAGC TATCCCGAAA TCGGCGTGTC TGATGCGCGC GACCGGCACG CCGAATACAG GGCAATGGTC GAGCAGGGCA CTGATCCGGC CGAACACCGG CGCCAGGACA AGGCAGAGCG CAAGGCCAAG GAATCACTGC AGGAGGATGA GGGGCTATTC AAGGCGTTCT CCCTCAAGTG GATCGATGAG CGCTTGGCTA CGAAAACCGA GGGGTACCGC AGCCAGATCA AGTCGCGCTT GGAACGTTTC GTGTGGCCGG TCATCGGCCG CAAGGCCTTA GAAGACGTGA AGCCGTCCCA CCTGCTGGAG ATCATCGAGG CCCGGCGCGC CACGCCAAAC ACCGCGGAGG GCGTACGGGT CATCATTCAG CAGATCTACA ACTACGCCAT CCAGAAGCTG CTTGTAGAGA GCAATCCGGC AGTTCCTCTG CGCGGCGTCA TCACCGTGCC CAAGGCTGAG CACCATCGGC ACCTCAGCGA ATCGGAACTG GGCGCGTTCT GGCGCGCTCT CGGGCGCCAG GGCGCACACC CGGCTACCAC CGCGGCGGCG CGCCTGCTGG TCTACAGCAT GTGCCGCAAG TCCGAGGTGC TGCGCGCGAA GTGGGCGGAG TTCGATCTCG ACAAAGCCCA GTGGGACATC CCTGCCGAGC GGATGAAGTC GCGCCGCCCA CATCGTGTGT ATCTGTCGCG CCAAGCCATT GAGTTGTTGG AGATCATGCG CGCGATCAGC GGCGATGGGG TGTACGTCCT CCCCTCGGTG AAGATCGCCA GCGTGCCGTT GGCCGAGGCC ACGCTGAACC ACCTGTTCAA ACGCCTGGAC TTCGGCGTGC CCGAGTTTTC CCCGCACGGC ACGCGTGGCA CTGCGGCGAC GCTACTGCGC GAGCACGGAT TTAGCCGGGA TGTGGTTGAG CTGCTACTTG CCCACACTGA GCGCAGCCAG ACGGCGGCGA GCTACCACCA TCACGAACTG GAAGCGGAGC GGCGCAAGGC GCTGCAGTAC TTGGCAGATG AGATCGATCG GCAGGCGGCC ATATCGGCAG CCGGCAATGT GGTGAGTCTC AAGGGCCGGG CAGCATAA
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Protein sequence | MRHFNYKLTP TRINNAKPKE QPYKLTDGGG LFVLVHPGGS KAWRYQYMLS GKRRSVLIGS YPEIGVSDAR DRHAEYRAMV EQGTDPAEHR RQDKAERKAK ESLQEDEGLF KAFSLKWIDE RLATKTEGYR SQIKSRLERF VWPVIGRKAL EDVKPSHLLE IIEARRATPN TAEGVRVIIQ QIYNYAIQKL LVESNPAVPL RGVITVPKAE HHRHLSESEL GAFWRALGRQ GAHPATTAAA RLLVYSMCRK SEVLRAKWAE FDLDKAQWDI PAERMKSRRP HRVYLSRQAI ELLEIMRAIS GDGVYVLPSV KIASVPLAEA TLNHLFKRLD FGVPEFSPHG TRGTAATLLR EHGFSRDVVE LLLAHTERSQ TAASYHHHEL EAERRKALQY LADEIDRQAA ISAAGNVVSL KGRAA
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