| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2733 |
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| Symbol | |
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| ID | 6286252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2848415 |
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| End bp | 2850703 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642626305 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001900290 |
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| Protein GI | 187929803 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.354308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.381492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGC AAGAACTGGA AGTCAGCCTG CACATGGCGT TTGTTGAAGC CCGCCAGGCT
CGCCACGAAT TCATTACGGT GGAGCATCTG CTGCTTGCGC TGCTGGACAA CCCGACGGCC
GCCGAGGTGC TTCGCGCCTG CGCTGCCAAC ATCGAAGACC TCCGCACGCA CCTGAAGAAC
TTCATCGCCG ACAACACCCC GGTGGTACCG GGCACGGACG AGGTGGACAC GCAGCCGACA
CTCGGCTTCC AGCGCGTGAT CCAGCGCGCC ATCATGCACG TGCAATCCAC ATCGAACGGG
AAGAAGGAAG TGACGGGCGC GAACGTGCTG GTCGCCATCT TCGGCGAGAA GGATTCGCAC
GCGGTGTACT ACCTCCAGCA ACAGGGCGTG ACCCGGCTGG ACGTCGTCAA CTTCATCAGC
CACGGCATCC GCAAGGACCA GGCCGAGCCT GCCAAGCAAG GCGAAGGCAA CCCCGAGGGC
GAAGGCGGCG ACGGCAAGGA AAGCCCGCTC GAGCAATTCA CGCAAAACCT GAACGCGTTG
GCCAAGGCCG GCAAGATCGA TCCCCTGATC GGTCGCGAGC AGGAAGTGGA GCGCGTGGTG
CAGGTGCTTT GCCGCCGGCG TAAAAACAAC CCGCTGCTGG TGGGCGAGGC CGGTGTCGGC
AAGACGGCCA TCGCAGAAGG CTTGGCATGG CGCATCACCA AGGGCGAAGT GCCGGACATC
CTGGCAAAGT CCGTCGTCTA CTCGCTCGAC ATGGGCGCGC TGCTGGCCGG CACGAAGTAC
CGCGGCGACT TTGAGCAACG CCTGAAGGGC GTGCTGAAGT CGCTCAAGGA CAACCCGAAC
GCGATTCTGT TCATCGACGA GATCCACACG CTGATTGGCG CAGGCGCCGC TTCGGGCGGC
ACGCTGGACG CCAGCAACCT GCTCAAGCCC GCGCTGTCGT CGGGCGCGCT CAAGTGCATC
GGTGCGACGA CGTTCACGGA ATACCGCGGC ATTTTCGAGA AGGATGCTGC GCTGTCCCGC
CGCTTCCAGA AGATCGACGT GGTGGAGCCG ACGGTCGACC AGACCGTCCA GATTCTGCGT
GGCCTGAAGT CGCGCTTTGA AGAACACCAT GGCGTGAAGT ACGCGTCGTC GGCGCTGACC
GCCGCGGCTG AATTGTCGGC GCGCTTCATC ACCGATCGTC ACCTGCCGGA CAAGGCGATC
GACGTGATCG ACGAAGCCGG TGCAGCGCAG CGCATCCTGC CGAAGTCGAA GCAGAAGAAG
ACCATCGGCA AGGGTGAGAT CGAGGACATC GTCTCGCGTA TTGCCCGCGT TCCGCCGCAA
AGCGTGTCGC AGGACGACCG CAGCAAGCTG CAGACGCTGG AGCGCGACCT GAAGTCGGTC
GTGTTCGGGC AGGACCCGGC CATTGATGCG CTTGCTTCGG CCATCAAGAT GTCGCGCGCC
GGGCTGGGCA AGACGGACAA GCCGATCGGC TCGTTCCTGT TCAGCGGCCC GACGGGCGTG
GGCAAGACGG AAGTCGCCAA GCAGCTCGCG TTCATCCTCG GCATCGAGCT GATCCGTTTC
GACATGTCGG AGTACATGGA GCGCCATGCG GTGAGCCGGC TGATCGGCGC GCCTCCGGGC
TACGTGGGCT TCGATCAGGG CGGCCTGCTG ACGGAAGCCG TGACCAAGAA GCCGCACTGC
GTGCTGCTGC TGGACGAGAT CGAAAAGGCG CACCCGGACA TCTTCAACAT CCTGCTGCAG
GTGATGGACC ACGGCGCGCT GACGGACAAC AACGGCCGCA AGGCGGACTT CCGCAACGTG
ATCATCATCA TGACGACCAA TGCGGGCGCC GAGACAATGA ACAAGGCAAC GATCGGTTTC
ACCACGGCGC GCGAACAGGG CGACGAGATG GCCGACATCA AGCGCATGTT CACGCCTGAG
TTCCGCAACC GTCTGGACGC AACCATCAGC TTCCGCTCGC TGGATGAGGA AATCATCATG
CGCGTGGTCG ACAAGTTCCT CATGCAGCTG GAAGAGCAAC TGCACGAGAA GAAGGTGGAT
GCCATCTTCA CCGAGAAGCT GCGTCGCTTC CTGGCGAAGA AGGGGTTCGA CCCGCTGATG
GGTGCACGCC CGATGCAGCG CCTGATTCAA GACCTGATCC GCAAGGCTCT GGCCGACGAA
CTGCTGTTCG GCAAGCTGGT CAACGGCGGC AAGGTGATCG TGGATCTGGA CGATGCAGAC
GCGGTGAAGC TGGAGTTCTC CGAGAACGAA GCGCCGCCGG CACCTGCCCA GGAAGAAGCG
GAAGCGTGA
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| Protein sequence | MIAQELEVSL HMAFVEARQA RHEFITVEHL LLALLDNPTA AEVLRACAAN IEDLRTHLKN
FIADNTPVVP GTDEVDTQPT LGFQRVIQRA IMHVQSTSNG KKEVTGANVL VAIFGEKDSH
AVYYLQQQGV TRLDVVNFIS HGIRKDQAEP AKQGEGNPEG EGGDGKESPL EQFTQNLNAL
AKAGKIDPLI GREQEVERVV QVLCRRRKNN PLLVGEAGVG KTAIAEGLAW RITKGEVPDI
LAKSVVYSLD MGALLAGTKY RGDFEQRLKG VLKSLKDNPN AILFIDEIHT LIGAGAASGG
TLDASNLLKP ALSSGALKCI GATTFTEYRG IFEKDAALSR RFQKIDVVEP TVDQTVQILR
GLKSRFEEHH GVKYASSALT AAAELSARFI TDRHLPDKAI DVIDEAGAAQ RILPKSKQKK
TIGKGEIEDI VSRIARVPPQ SVSQDDRSKL QTLERDLKSV VFGQDPAIDA LASAIKMSRA
GLGKTDKPIG SFLFSGPTGV GKTEVAKQLA FILGIELIRF DMSEYMERHA VSRLIGAPPG
YVGFDQGGLL TEAVTKKPHC VLLLDEIEKA HPDIFNILLQ VMDHGALTDN NGRKADFRNV
IIIMTTNAGA ETMNKATIGF TTAREQGDEM ADIKRMFTPE FRNRLDATIS FRSLDEEIIM
RVVDKFLMQL EEQLHEKKVD AIFTEKLRRF LAKKGFDPLM GARPMQRLIQ DLIRKALADE
LLFGKLVNGG KVIVDLDDAD AVKLEFSENE APPAPAQEEA EA
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