Gene Rpic_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2721 
Symbol 
ID6289054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2834798 
End bp2836195 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content68% 
IMG OID642626293 
ProductFmu (Sun) domain protein 
Protein accessionYP_001900278 
Protein GI187929791 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA ATCGTCAGCG TTCGGGCGGC AATGGAAGCG GCGGCGGGTC GGGCAACAAG 
CGCGCGGGTT CGGGTGGTGG CGGCTGGTAT CGGGCCCCGC AGGGCAAGCC TGCACCCCGC
AGCGCGCCGC GCCCCCGCAC GGGCGTGCAT GGCAGCCACC TGGAACACCT GGACAAGGTG
CTTGCGCGCC TGCTGCACTT TGCGGCTCCC GCCGACATGG TGGTCAGCCA GTATTTCCGT
GAGCACCACG AACTTGGCCA CCGCGAGCGC GGCATCATCG CCGAAGCGGC GTTTGCCGTG
CTGCGCCGCA AGGTGGAATT CGGCCAGTTT GCCGAGAGCG GCACGGGCCC GGCGCGTCGT
CGCCTGGTGC TGCTGGGCTT GCTGCAGACC GCCGGGCGTG AGGCCATTGC CCCGTTCCTG
AACCCCGTAG AAGCCGAATG GCTGGATCGC TGGGAAAACC GTGACCGCGC CGCGCTGGCG
GCCCGCGTGC GCGCCAACCT GCCCGACTGG CTCTTCGATG CGCTAGTTGC CCAGCACGGT
GCGGAGTTCA CCGAAGCACT GGCGCAAGCA TGGCTCACGC CGGCGCCGCT GGACTTGCGC
GTGAACACGC TCAAGGGCGA ACGCGACGCC GTACTCGCCA CGCTTGCCGA AGCCGGTATT
GAAGGCAGTG CAGCGCCGCT CTCGCCGGTG GGCATTCGCC TGGCCGGCAA GCCGGCGTTG
AACAAGCTCG ATATCTTCAC CAACGGCACG GTCGAGGTGC AGGACGAGGG CAGCCAACTG
CTGTGCCAAT TGCTGGCACC CAAGCGCGGC GAGATGGTGG TCGATTTCTG CGCCGGCGCC
GGTGGCAAGA CCCTGGCGAT CGGCGCGGCG ATGCGCTCGA CCGGGCGCCT GTATGCCTTC
GACGTATCGG AAAAGCGCTT GTCGAACCTG GGCCCGCGCC TGGCGCGCAG CGGTTTGTCC
AACGTGCATC CCGGTCGCAT CGACAGCGAG CACGATGCCA AGGTCAAGCG CCTGGCGGGC
AAGATCGATC GTGTGTTGGT CGACGCGCCG TGCAGCGGCT TGGGCACGCT GCGCCGCAAT
CCGGACCTGA AGTGGCGCCA GTCCGCACAG GCCGTGGAAG AAATGTCGGC CAAGCAGTTG
TCGATCCTGA CATCGGCGGC GCGGCTGCTG AAGCCGGGCG GTCGCCTCGT CTACGCGACC
TGCAGCGTGC TGGCGCGCGA GAACCAGCAG GTGGTTGAGC AGTTCCTGGC CGCGCATGAA
GATTTCGTGC TCGTGCCCGC CGGTGAGGTG CTGGCCGCGC AGAAGATCGC GCTGGAAATG
GGGCCTTACC TGGAGCTGTA TCCACACACA CATCAGACCG ACGGCTTCTT CGCGGCCGTG
CTGGAGCGCC GCGCATGA
 
Protein sequence
MSQNRQRSGG NGSGGGSGNK RAGSGGGGWY RAPQGKPAPR SAPRPRTGVH GSHLEHLDKV 
LARLLHFAAP ADMVVSQYFR EHHELGHRER GIIAEAAFAV LRRKVEFGQF AESGTGPARR
RLVLLGLLQT AGREAIAPFL NPVEAEWLDR WENRDRAALA ARVRANLPDW LFDALVAQHG
AEFTEALAQA WLTPAPLDLR VNTLKGERDA VLATLAEAGI EGSAAPLSPV GIRLAGKPAL
NKLDIFTNGT VEVQDEGSQL LCQLLAPKRG EMVVDFCAGA GGKTLAIGAA MRSTGRLYAF
DVSEKRLSNL GPRLARSGLS NVHPGRIDSE HDAKVKRLAG KIDRVLVDAP CSGLGTLRRN
PDLKWRQSAQ AVEEMSAKQL SILTSAARLL KPGGRLVYAT CSVLARENQQ VVEQFLAAHE
DFVLVPAGEV LAAQKIALEM GPYLELYPHT HQTDGFFAAV LERRA