Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2721 |
Symbol | |
ID | 6289054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2834798 |
End bp | 2836195 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642626293 |
Product | Fmu (Sun) domain protein |
Protein accession | YP_001900278 |
Protein GI | 187929791 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGA ATCGTCAGCG TTCGGGCGGC AATGGAAGCG GCGGCGGGTC GGGCAACAAG CGCGCGGGTT CGGGTGGTGG CGGCTGGTAT CGGGCCCCGC AGGGCAAGCC TGCACCCCGC AGCGCGCCGC GCCCCCGCAC GGGCGTGCAT GGCAGCCACC TGGAACACCT GGACAAGGTG CTTGCGCGCC TGCTGCACTT TGCGGCTCCC GCCGACATGG TGGTCAGCCA GTATTTCCGT GAGCACCACG AACTTGGCCA CCGCGAGCGC GGCATCATCG CCGAAGCGGC GTTTGCCGTG CTGCGCCGCA AGGTGGAATT CGGCCAGTTT GCCGAGAGCG GCACGGGCCC GGCGCGTCGT CGCCTGGTGC TGCTGGGCTT GCTGCAGACC GCCGGGCGTG AGGCCATTGC CCCGTTCCTG AACCCCGTAG AAGCCGAATG GCTGGATCGC TGGGAAAACC GTGACCGCGC CGCGCTGGCG GCCCGCGTGC GCGCCAACCT GCCCGACTGG CTCTTCGATG CGCTAGTTGC CCAGCACGGT GCGGAGTTCA CCGAAGCACT GGCGCAAGCA TGGCTCACGC CGGCGCCGCT GGACTTGCGC GTGAACACGC TCAAGGGCGA ACGCGACGCC GTACTCGCCA CGCTTGCCGA AGCCGGTATT GAAGGCAGTG CAGCGCCGCT CTCGCCGGTG GGCATTCGCC TGGCCGGCAA GCCGGCGTTG AACAAGCTCG ATATCTTCAC CAACGGCACG GTCGAGGTGC AGGACGAGGG CAGCCAACTG CTGTGCCAAT TGCTGGCACC CAAGCGCGGC GAGATGGTGG TCGATTTCTG CGCCGGCGCC GGTGGCAAGA CCCTGGCGAT CGGCGCGGCG ATGCGCTCGA CCGGGCGCCT GTATGCCTTC GACGTATCGG AAAAGCGCTT GTCGAACCTG GGCCCGCGCC TGGCGCGCAG CGGTTTGTCC AACGTGCATC CCGGTCGCAT CGACAGCGAG CACGATGCCA AGGTCAAGCG CCTGGCGGGC AAGATCGATC GTGTGTTGGT CGACGCGCCG TGCAGCGGCT TGGGCACGCT GCGCCGCAAT CCGGACCTGA AGTGGCGCCA GTCCGCACAG GCCGTGGAAG AAATGTCGGC CAAGCAGTTG TCGATCCTGA CATCGGCGGC GCGGCTGCTG AAGCCGGGCG GTCGCCTCGT CTACGCGACC TGCAGCGTGC TGGCGCGCGA GAACCAGCAG GTGGTTGAGC AGTTCCTGGC CGCGCATGAA GATTTCGTGC TCGTGCCCGC CGGTGAGGTG CTGGCCGCGC AGAAGATCGC GCTGGAAATG GGGCCTTACC TGGAGCTGTA TCCACACACA CATCAGACCG ACGGCTTCTT CGCGGCCGTG CTGGAGCGCC GCGCATGA
|
Protein sequence | MSQNRQRSGG NGSGGGSGNK RAGSGGGGWY RAPQGKPAPR SAPRPRTGVH GSHLEHLDKV LARLLHFAAP ADMVVSQYFR EHHELGHRER GIIAEAAFAV LRRKVEFGQF AESGTGPARR RLVLLGLLQT AGREAIAPFL NPVEAEWLDR WENRDRAALA ARVRANLPDW LFDALVAQHG AEFTEALAQA WLTPAPLDLR VNTLKGERDA VLATLAEAGI EGSAAPLSPV GIRLAGKPAL NKLDIFTNGT VEVQDEGSQL LCQLLAPKRG EMVVDFCAGA GGKTLAIGAA MRSTGRLYAF DVSEKRLSNL GPRLARSGLS NVHPGRIDSE HDAKVKRLAG KIDRVLVDAP CSGLGTLRRN PDLKWRQSAQ AVEEMSAKQL SILTSAARLL KPGGRLVYAT CSVLARENQQ VVEQFLAAHE DFVLVPAGEV LAAQKIALEM GPYLELYPHT HQTDGFFAAV LERRA
|
| |