| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2720 |
|---|
| Symbol | |
|---|
| ID | 6289053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2834217 |
|---|
| End bp | 2834801 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642626292 |
|---|
| Product | putative endonuclease protein |
|---|
| Protein accession | YP_001900277 |
|---|
| Protein GI | 187929790 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGTGC GCCGCTTGGG GTGGCTGCTG GCCGCATGGC TGGCGTTTGC TGCAGGTGGT
GTCGCACTGG CCCGCAGCGC GCCGCCGGTG CAGCCGGCCA AGGGCACGGT GCAGGCAGCG
TTTACGCCGG ATGACGACAT CGAAGGGTTG TTGGCCGATG CCATTGACCA GGCGCGCGAG
CAGGTGCTGG TGCAGGCGTA TCTGCTGTCG AACAAGGCGA TTACGCGTGC GCTGCTGGCG
GCGCATCAGC GTGGCGTTGA TGTGCGCGTG CTGGCCGATC GCGAGCAGAT GACGCGCTCC
GGCGGCAGCC GCGTGCCCGA GGTCGCCAAT GCGGGCATCC CAGTCTGGCT GGAGGTGCGC
TATAAAAATG CGCACAACAA GGTCATCGTG ATCGACCCGC GCGGCGCGCA TCCGGTGCTG
GTCACCGGCA GCTTCAATTT CACGCAGACC GCGCAGCGCG GCAATGCCGA GAACGTACTG
ATCGTGCGCG GCGACGCCGA TCTCGCCCAG CGCTATGCCG CCAACTGGCA GAAGCATGCG
GGTGACGCGT TGCCCTATCG AGCCCAACAA CCGGCCGCCC AATGA
|
|---|
| Protein sequence | MMVRRLGWLL AAWLAFAAGG VALARSAPPV QPAKGTVQAA FTPDDDIEGL LADAIDQARE
QVLVQAYLLS NKAITRALLA AHQRGVDVRV LADREQMTRS GGSRVPEVAN AGIPVWLEVR
YKNAHNKVIV IDPRGAHPVL VTGSFNFTQT AQRGNAENVL IVRGDADLAQ RYAANWQKHA
GDALPYRAQQ PAAQ
|
|---|
| |