Gene Rpic_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2717 
Symbol 
ID6289101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2829947 
End bp2831095 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content63% 
IMG OID642626289 
Productquinolinate synthetase 
Protein accessionYP_001900274 
Protein GI187929787 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC ACATCAAGAC GGTTGAATTC GAGCGCCCGG ATATGCTTTC CGAGGCGCAA 
TCCGGCGCCA GTTGCGTGGC TCACGCCTGG GCCAAGGTGC CGCCGGTGCT GTCGCGTGAG
GAACGCGACG AACTGAAGGC CCGCATCAAG CGCCTGCTCA AGGAACGCGA GGCCGTGCTG
GTCGCGCACT ACTACGTTGA CGCCGACCTT CAGGATCTGG CCGAGGAGAC CGGTGGCTGC
GTGTCCGATT CGCTGGAGAT GGCGCGCTTT GGCCGCGACC ATTCGGCTAA GACATTGATC
GTGGCGGGCG TGCGCTTCAT GGGCGAGACC GCCAAGATTC TGAGTCCTGA AAAGACCGTG
CTGATGCCTG ATCTGGATGC GACCTGCTCG TTGGATCTGG GTTGCCCGCC GGATGAGTTC
GCCGCCTTCT GCGACGCGCA TCCGGATCGC ACCGTGGTCG TCTATGCCAA TACCAGCGCC
GCCGTGAAGG CGCGCGCGGA CTGGATGGTG ACGTCTTCCA TCGGCCTGAA GATCGTGCAG
CACCTGCACG CGCAGGGAAA GAAGATCCTG TGGGCACCCG ATCGCCATCT CGGCAGCTAC
ATTCAGAAGC AGACCGGCGC CGACATGCTG ATGTGGCAGG GCTCGTGCTT GGTGCACGAC
GAATTCAAGG GCGTGGAGCT TGACCTGCTG CGTGCCGAGC ACCCGAACGC GAAGATTCTC
GTGCATCCGG AATCGCCGGA ATCGGTCGTG GCCCAGGCCG ATGTCGTGGG TTCGACTTCG
CAGCTGATTG CCGCAGCGCA GTCATTGTCG GCGCAGGAAT TTATTGTCGC GACCGACAAC
GGCATCCTGC ACAAGATGCG CATGGCCGCC CCGGGCAAGC GCTTCATCGA GGCGCCGACC
GCCGGCAACG CTGCCACCTG CAAGAGCTGC GCGCATTGCC CCTGGATGGC GATGAACGCG
CTGACCAATC TGGCCGAGGT GCTGGAAACC GGTCGCAACG AGATCCACGT CGATCCGGCC
ATCGGGCGGC AAGCCGTGGT CTGCATCGAT CGCATGCTGG ACTTTGCCGC GCGCGAGAAA
GCCACGGTTC GCCCGCAAGG CGACCTGGCC GCGAACGCAC AACTCTTTCA AGGAATCGGC
CCGGCATGA
 
Protein sequence
METHIKTVEF ERPDMLSEAQ SGASCVAHAW AKVPPVLSRE ERDELKARIK RLLKEREAVL 
VAHYYVDADL QDLAEETGGC VSDSLEMARF GRDHSAKTLI VAGVRFMGET AKILSPEKTV
LMPDLDATCS LDLGCPPDEF AAFCDAHPDR TVVVYANTSA AVKARADWMV TSSIGLKIVQ
HLHAQGKKIL WAPDRHLGSY IQKQTGADML MWQGSCLVHD EFKGVELDLL RAEHPNAKIL
VHPESPESVV AQADVVGSTS QLIAAAQSLS AQEFIVATDN GILHKMRMAA PGKRFIEAPT
AGNAATCKSC AHCPWMAMNA LTNLAEVLET GRNEIHVDPA IGRQAVVCID RMLDFAAREK
ATVRPQGDLA ANAQLFQGIG PA