Gene Rpic_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2715 
Symbol 
ID6289203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2827440 
End bp2829041 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content64% 
IMG OID642626287 
ProductL-aspartate oxidase 
Protein accessionYP_001900272 
Protein GI187929785 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCG ATGTTGCCGT TGTTGGCAGC GGCTTGGCGG GCCTGACCGT CGCCCTGCAC 
CTAGCCGATC ACCGCCGCGT GGTCGTCATC AGCAAACGCA GCCTGCCGGA AGGCGCCAGC
GATTGGGCGC AGGGCGGCAT TGCCGCCGTG CTCGATTCGG GCGACAGCCA TGACGAACAC
GTCGACGACA CGCTCATCGC TGGCGCAGGA CTGTGCGATG AAGCGGCTAC CCGCTACATC
GTCGAGAACG GGCGCTCGGC CATTGAATGG CTGATCAGCC ATGGCGTGCC TTTCACGCGC
GATGAGCAGG CCGAACTCGG CTTCCACCTG ACACGCGAAG GCGGCCATCG CCATCGACGC
ATCATCCACG CAGCCGATGC CACCGGCCAT GCCGTCGTCA CGACGCTGGT TGAGAAGGTA
CGCAACCACC CGAACATCAC GCTGCTGGAA GACCACTTCG CGATCGACCT GATTACCGAT
GCGAAGCTGG GTCGGCCGGG CATGCGTTGC CATGGCCTCT ACGCGCTCGA CATTGCATCG
GGCCATGTCA AGACGATTAC CGCGAGCCAA ACCGTGATGG CCACGGGCGG TGCGGGTAAG
GTCTATCTCT ACACGACGAA TCCGGACACG GCCAGCGGCG ACGGTATTGC CATGGCGTGG
CGAGCGGGCT GCCGCGTGGC GAACATGGAG TTCATCCAGT TCCACCCCAC GTGCCTGTAC
CACCCGTTCG CGAAGTCCTT CCTGATTACC GAGGCCGTGC GCGGTGAAGG CGGCAAGCTG
ATCCTGCCCG ACGGCACGCG TTTCATGCCC GCGCACGACG ATCGCGCAGA ACTGGCTCCG
CGCGATATCG TCGCCCGCGC GATCGACTTC GAGATGAAGA AGCGTGGGCT GGACTGCGTC
TATCTGGACA TCAGCCATCA GAGCCCGGCG TTCCTCAAGG AACATTTCCC GACCATCATG
GCGCGCTGCC TGGAGCTGGG CATCGACATC ACGCGCCAAC CGATTCCGGT CGTGCCGGCG
GCGCACTACA CGTGCGGCGG TGTGGTCACA GACCACCTCG GGCGCACGGA TATCGCCGGC
CTGTACGCCG TTGGCGAGAC TGCTTACACC GGCCTGCACG GCGCCAACCG GCTGGCGAGC
AATTCGCTGC TGGAATGCAT GGTGATCGGG CGTGGCGCGG CGGAAGACAT CCTGGCGCAG
CCGCCCTCGA ACCCGACCTC GGTGCAGATT CCCGCGTGGG ATGAGAGCCG CGTGACCGAT
CCCGATGAGG AAGTCGTCGT CTCGCACAAC TGGGACGAAC TGCGTCGCAT GATGTGGAAC
TACGTCGGCA TCGTGCGCAC GAACAAGCGG CTGGAGCGGG CGCAGCACCG CATTGCGCTG
TTGCGCGAAG AGATTACGGA GTACTACGCC AACTTCCGCG TGAGCCACGA TCTGCTCGAG
CTGCGCAACC TCGTCGAGGC CGCCTCGCTG ATCGTCGACA GTGCGCTGTC ACGGCATGAG
AGCCGCGGCC TGCATTTCTC GCGCGACTAC CCCGAAACGC TACCCAAGGC ACTGCCGACG
GTCATGCAGC CGACCCATCG GCAGATCGCC CGGAAACGCT GA
 
Protein sequence
MNFDVAVVGS GLAGLTVALH LADHRRVVVI SKRSLPEGAS DWAQGGIAAV LDSGDSHDEH 
VDDTLIAGAG LCDEAATRYI VENGRSAIEW LISHGVPFTR DEQAELGFHL TREGGHRHRR
IIHAADATGH AVVTTLVEKV RNHPNITLLE DHFAIDLITD AKLGRPGMRC HGLYALDIAS
GHVKTITASQ TVMATGGAGK VYLYTTNPDT ASGDGIAMAW RAGCRVANME FIQFHPTCLY
HPFAKSFLIT EAVRGEGGKL ILPDGTRFMP AHDDRAELAP RDIVARAIDF EMKKRGLDCV
YLDISHQSPA FLKEHFPTIM ARCLELGIDI TRQPIPVVPA AHYTCGGVVT DHLGRTDIAG
LYAVGETAYT GLHGANRLAS NSLLECMVIG RGAAEDILAQ PPSNPTSVQI PAWDESRVTD
PDEEVVVSHN WDELRRMMWN YVGIVRTNKR LERAQHRIAL LREEITEYYA NFRVSHDLLE
LRNLVEAASL IVDSALSRHE SRGLHFSRDY PETLPKALPT VMQPTHRQIA RKR