Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2710 |
Symbol | ispH |
ID | 6286725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2824396 |
End bp | 2825379 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626282 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001900267 |
Protein GI | 187929780 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG CTGTGAACGC CCCGCTCGAT CCCATTGATC CTGTCACCCA GGCCGACGCC GAGGTCTTGC TGGCGCAGCC GCGCGGCTTC TGCGCCGGCG TGGATCGTGC CATCGAGATC GTCGAGCGCG CGCTGGAGTT GTTTGGCGCG CCGATTTACG TTCGTCACGA GATCGTGCAC AACGCTTATG TGGTTGGCGA TCTGCGCAAC AAGGGCGCGG TGTTCGTGCA GGAACTCGAC GATGTGCCAG TGGGTGGCAC AGTCATCTTC AGTGCGCACG GCGTGTCACG GGCGGTGCGT GAGGCGGCGG AAGCGCGCGG CCTGCGCGTG TTCGATGCGA CCTGCCCGCT GGTGACCAAG GTGCACGTGG AAGTCTCGAA GATGCGTGCG CAGGGTTTCG AGATCATCAT GATCGGGCAC AAGGGCCATC CCGAGGTGGA AGGCACCATG GGGCAGGCCA ACGACGGCAT GCTGCTGGTT GAGTCCGTCG ATGACGTTGC GCATCTCGAG GTGAAAGACT CGACGCGTCT GGCCTACGTG ACGCAGACCA CGCTGTCGGT GGATGAGACC CAGGAGATCG TGGCGGCCAT CAAAGCGCGC TTTCCGGCCG TGCACGAGCC CAAGAAGCAG GACATCTGCT ACGCGACGCA GAATCGCCAG GACGCCGTGA AGTTCATGGC GCCGCAGGTG GAAGTGGTGA TCGTGGTCGG CAGCCCGAAC AGCTCGAACT CGAACCGCCT GCGTGAACTG GCCGAAAAGC TGGGCGTACC TGCCTATATG GTGGATACAC CTGAACAGGT GCGCCCCGAA TGGGTGGCTG GCAAGCGCCG CGTGGGCCTG ACCGCGGGGG CGTCGGCACC CGAAGAGCTG GCGCAATCGA TTGTCGATCG GCTCAAGGCG CTGGGCGCAC GCACCGTGCG CCCGCTCGAC GGTATTCAGG AAAACATGTC TTTCCCCCTT CCGAGGGGGC TTCAAATCAA TTGA
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Protein sequence | MSNAVNAPLD PIDPVTQADA EVLLAQPRGF CAGVDRAIEI VERALELFGA PIYVRHEIVH NAYVVGDLRN KGAVFVQELD DVPVGGTVIF SAHGVSRAVR EAAEARGLRV FDATCPLVTK VHVEVSKMRA QGFEIIMIGH KGHPEVEGTM GQANDGMLLV ESVDDVAHLE VKDSTRLAYV TQTTLSVDET QEIVAAIKAR FPAVHEPKKQ DICYATQNRQ DAVKFMAPQV EVVIVVGSPN SSNSNRLREL AEKLGVPAYM VDTPEQVRPE WVAGKRRVGL TAGASAPEEL AQSIVDRLKA LGARTVRPLD GIQENMSFPL PRGLQIN
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