| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2666 |
|---|
| Symbol | |
|---|
| ID | 6288605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2778995 |
|---|
| End bp | 2780005 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642626237 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001900224 |
|---|
| Protein GI | 187929737 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.616984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAC CTGCACTGCC CGCACGCGGT TTTGCCTGGC GACTGTGGTC GCTGCTGGCA
CTCGCGTGCG TGGTGGTGCT GGCGGCGTCG TTGATGCTCG GCAGTGTGAA GCTGTCGCTC
GCTGAAGTCT GGCGGGCGCT GATCGGCGGT GGCGATAGCC TGGCTGCGGG CATCGTCATC
GAATTGCGCC TGCCGCGCGC GGGCGCTGCA TTTGCTGCTG GCGGGCTGTT GGCCTTTGCC
GGGGCGCTCA TGCAGATGCT GCTGCGCAAT CCGCTGGCCG ATCCGTATGT CCTGGGCGTG
TCCGGTGGCG GGGCAGTGGC GGCGCTCACG GCGATGTTGT TTTCGCTGCC GTGGTGGTTG
GTGCAGACGA GTGCCGGCGC GGGAGCATTG CTGTCGATGG CGCTGGTGGC GGCGTTGGCG
CGTCAGCACC TGTGGCGCGG TGAGCCCGGC GAGGCCAATG CGCGCCTACT GCTCGGTGGC
GTGGTGATGG CCTCCGGCTG GGTCGGCCTG ATCACGCTCA TCTTGACGGT GGCGCCCGAG
AACAAGCTGC GCGGCATGAT TTTCTGGATG GTCGGCGACC TCGGTGGCGC CGATCGTTAT
GCGGGCGCGT TGATGGCGCT CGTGGCGGCG GTGGCCGTGG TGTTGCCGCA TGCGCGCGAC
CTGAACGTGC TGCTGACCGG CGAAACCCGC GCCCGTGCGC TTGGGGTGCC CGTGGCGCGC
GTGCGTGCGT TGATCTACGT GGTGGCGTCG CTGTGCACGG CGGTAGCGGT GACCATTGCG
GGCTCGGTCG CTTTTGTCGG CCTGCTGGTG CCGCATATGG TGCGCCTGGC GTGGACCCGC
GACGTGCGCA TCCACTTGCC CGCTACGGCG ATGGCCGGCG GCGGGCTGCT GATGCTGGCC
GACCTGATCG CCCGGACGCT GATCGCCCCA ACGCAACTGC CGGTGGGTGT GATCACCACC
ATGCTTGGCG TGCCGACGTT TCTCTACCTG CTGATGCGGA GCACGCGATG A
|
|---|
| Protein sequence | MTTPALPARG FAWRLWSLLA LACVVVLAAS LMLGSVKLSL AEVWRALIGG GDSLAAGIVI
ELRLPRAGAA FAAGGLLAFA GALMQMLLRN PLADPYVLGV SGGGAVAALT AMLFSLPWWL
VQTSAGAGAL LSMALVAALA RQHLWRGEPG EANARLLLGG VVMASGWVGL ITLILTVAPE
NKLRGMIFWM VGDLGGADRY AGALMALVAA VAVVLPHARD LNVLLTGETR ARALGVPVAR
VRALIYVVAS LCTAVAVTIA GSVAFVGLLV PHMVRLAWTR DVRIHLPATA MAGGGLLMLA
DLIARTLIAP TQLPVGVITT MLGVPTFLYL LMRSTR
|
|---|
| |