Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2651 |
Symbol | |
ID | 6288811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2765825 |
End bp | 2766529 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642626222 |
Product | conjugal transfer protein TrbF |
Protein accession | YP_001900209 |
Protein GI | 187929722 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3701] Type IV secretory pathway, TrbF components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0552472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.84636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTCA AACGACCGCA GGTGCGCTAC GCCGACACGC CGCAGCCTGC CACCCCGTAC CAATCCGCCG CGCAAGTCTG GGACGAGCGC ATCGGCTCGG CCCGCGTGCA GGCTAGAAAC TGGCGTTTCA TGGCCTTTGG CTGCCTCACC TTGGCCGTGC TGATGGCCGG TGGTCTGGTC TGGCGCTCCG CGCAATCCAT CGTCACGCCC TACGTCATCG AGGTGGATAA CGCGGGCCAG GTGCGCGCGG TCGGCGAGGC CGCCACGCCG TACCGGCCCA GCGATGCGCA GATCGCCTAC CACCTGGGCC GCTTCATCGG CCTGGTGCGC AGCCTGTCCA TCGACCCCAT CGTGGTGCGG CAGAACTGGC TCGATGCCTA CGACTACACG ACCGACAAGG GCGCTGTTGT GCTCAACGAG TACGCCCGCG TGAACGATCC GTTCGCGCGC ATCGGCAAGG AGTCAGTGAC GGTGCAGATC ACCAGCGTGA CCCGCGCCAG TGACACGTCT TTCAACGTGC GCTGGACGGA GACGCGCTTC GTCAATGGCG CGCTGGATCG CACCGAACGC TGGAACGCCG TGGTTTCCAT CGTGCAGCAG ACGCCGCGCA CCGAGCAGCG CCTGCGCAAG AACCCCCTGG GCATCTACGT CAACGGCCTG TCGTGGAGCC GCGAACTGGA AGGAAACGAA GGAGCAAAAC CATGA
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Protein sequence | MRFKRPQVRY ADTPQPATPY QSAAQVWDER IGSARVQARN WRFMAFGCLT LAVLMAGGLV WRSAQSIVTP YVIEVDNAGQ VRAVGEAATP YRPSDAQIAY HLGRFIGLVR SLSIDPIVVR QNWLDAYDYT TDKGAVVLNE YARVNDPFAR IGKESVTVQI TSVTRASDTS FNVRWTETRF VNGALDRTER WNAVVSIVQQ TPRTEQRLRK NPLGIYVNGL SWSRELEGNE GAKP
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