| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2649 |
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| Symbol | |
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| ID | 6288809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2763686 |
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| End bp | 2764441 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626220 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001900207 |
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| Protein GI | 187929720 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.556121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACCCC ATGCCCACAA TCTCGCCGCG CTGACCACCG CCTGCGTGCT CGCCTTCGGC
ATTGCGCAGC CCGCGCATGC ACTGTTCGGC GTTGGCGACA TCGTGTTCGA TCCGACCAAT
TTGGTGCAGA ACACGCTCAC CGCCGTTCGC ACGCTGGAGC AGATCAACAA CCAGATCCGC
CAGCTCCAAA ACGAAGCGCA GATGCTCATC AACCAGGCGC GCAACCTGGC CAGCCTGCCG
TCCAGCGTGG TGGGCCAGCT GCGCGCCAAC CTGGCGACCA CCCAGCGGCT CATCGCCCAG
GCCAAGGGCA TGGCCTACGA CGTGGCGAAC ATGGACCAGA TGTTCCAGCG TCTGTACCCC
GAACAGTACT CCGCCACCGT CAGCGGCAAT CAGATGTACC GCGATGCGCA GGAGCGCTGG
AAGAACACGC TCACTGGCCT TCAGACCACC ATGCAGATGC AGGCCCAGGC TTCGCAGAAC
CTGAGCGATG ACGAGGGCGT GCTGGCCGAC CTCGTGGGCA AGAGCCAGTC CGCCGTGGGC
GCTCTCCAGG CGATGCAGGC CATGAACCAG TTGCTGGCCC TGCAGGCCAA GCAGTCCATT
CAGACCCAGC GCTTGCAGAT CACGCAGGAC CGCGCGGCCT CGCTGGAGCT GGCGCGGCAG
GCCGCCGCAG TGGAGCGTGG CCGCGAGGTG AATCGGCGCT TCGTGGGCAC TGGCACGCCG
TACACGCCGC AGCCCGTGAA CTTCTACAGC CGCTGA
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| Protein sequence | MKPHAHNLAA LTTACVLAFG IAQPAHALFG VGDIVFDPTN LVQNTLTAVR TLEQINNQIR
QLQNEAQMLI NQARNLASLP SSVVGQLRAN LATTQRLIAQ AKGMAYDVAN MDQMFQRLYP
EQYSATVSGN QMYRDAQERW KNTLTGLQTT MQMQAQASQN LSDDEGVLAD LVGKSQSAVG
ALQAMQAMNQ LLALQAKQSI QTQRLQITQD RAASLELARQ AAAVERGREV NRRFVGTGTP
YTPQPVNFYS R
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