| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2643 |
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| Symbol | |
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| ID | 6289043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2757009 |
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| End bp | 2759027 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626214 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_001900201 |
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| Protein GI | 187929714 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGAA CGAACGTGCT GTTCGGTCAG ATTGCCGTCG TCTTCGGCAT CGTGATCGCT
GGCGTATGGA GCGCCACGCA ATGGACAGCA GCGGCCCTGG GCTACCAGCT ACGCCTGGGC
TCGCCGTGGT TCGACTTCTT CGGTACGCCG GTCTACCACC CCTGGGGCCT GTTCGAGTGG
TGGTTCTTCT TCGACGCCTA CGCGCCGCAT ATCTTCGACG CGGGCGGTGC CATTGCCGCA
GGCAGCGGCC TGATCGCGAT GGTAGTTGCC ATCGGCATGT CGATCTGGCG CTCGCGCCAG
TCCAAGCTGG TCACGACCTA CGGCTCGGCC CGCTGGGCCA ATGCGGAGGA CATCCACAAG
GCGGGCCTTG ACCAGCCTGC GGGCGTGTTC CTCGGCCTGC ATCGCCAGCA GTACCTGCGC
CATGAAGGCC CGGAACACGT CCTGACATTC GCGCCCACCC GCTCGGGCAA AGGCGTGGGC
CTGGTGGTTC CCACCTTGTT GAGCTGGCCT GCATCGGCCG TCATTCACGA CATCAAGGGC
GAGAACTGGA GCATCACCGC CGGCTGGCGC TCGCGCTTCT CGCATTGCCT GCTGTTCAAC
CCGACCGATG CGAAGTCGTC GGCCTACAAC CCACTGCTGG AGGTGAGGCG CGGCGCGCAC
GAAGTGCGCG ACGTGCAGAA CATCGCAGAC ATTCTGGTCG ATCCCGAAGG AGCACTGGAG
CGGCGCAACC ATTGGGAGAA GACCTCGCAT GCGCTGCTGG TTGGGGCCAT CCTGCACGTG
CTCTACGCAG GCGAAGACAA GACGCTGCGC GGAGTCGCCA ACTTCCTCAG CGACCCGGCC
TGTCCCTTCG AGCTGACCCT GCATCGGATG ATGACCACGC CGCACATCGG TGGTGGGCCG
CATCTGGTGG TGGCATCGGC AGCGCGCGAA GTCCTGAACA AATCGGACAA CGAGCGTTCC
GGCGTGTTGA GCACCGCCAT GTCATTCCTC GGCCTGTACC GCGACCCCAC GGTGGCCGAA
GTCACCTCGC GCTGCGACTG GCGCATTGCC GACCTGATCG CGGCCGAGCA TCCGGTGTCG
CTGTACCTGG TGGTGCCGCC TTCGGACATT TCGCGGACGA AACCGCTCAT TCGCCTGATC
CTCAACCAGA TCGGGCGACG GCTGACGGAA TCGCTCGACG GCAGCGACGG CATCGCGCGC
CGCCACAAGC TGCTATTGAT GCTCGACGAG TTCCCCGCGC TCGGACGGCT CGACTTCTTC
GAGACGGCCC TGGCCTTCAT GGCCGGCTAC GGTATCCGCA GCTTCCTCAT CGCCCAGTCG
CTCAACCAGA TTGACAAAGC CTACGGCCAG AACCATTCGA TCCTGGACAA CTGCCATGTC
CGGGTGACGT TCGCCACCAA CGACGAGCGC ACCGCCAAGC GCATCTCCGA AACGCTGGGC
ACCGCGACCG AGCTGCGCGC GCAGCGCAAC TACGCCGGCC ACCGGCTCGC GCCATGGCTC
GGGCATCTGA TGGTGTCGCG CCAGGAGACG GCACGTCCGC TGCTCACGCC GGGCGAGGTA
ATGCAGCTTC CGCCCGACGA GGCCGTGGTG ATGGTGTCCA GCGTGGCGCC CATCAAGGCC
AAGAAGCTGC GCTACTACGC GGACAGCAAT TTCAAGCGGC GCGTGCTTCC GCCGCCGGTG
CTTGCAACCC TGTCCATGCA GGGGCGCTAT GCCGATGTGC CACCGGAACG CGCCGACGAC
TGGAGCGGGC TGGCGATTCC CGCCATGCCG GTCGCACCGA CGGCCGACGC CGCCGATGGG
CTGGAGAACC TGGGTTCGGC CGACGACAGC GGCCCACGCC GCCAGCCCGA ACTTTCCGAA
GCCGTCACCT ACGACCCCGA CCTGGTTGCG CCCGCAGCCG ACCTCGGGCT GCTCGATGAC
GACGACATGC CGCATCCCCT TCCTCGCCAG CTCGATCCGG CCCTGCAGCG CACGGCCCGG
CTGGCTTCCC TCGACCCTGA CGACGGAATC GACCTATGA
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| Protein sequence | MQGTNVLFGQ IAVVFGIVIA GVWSATQWTA AALGYQLRLG SPWFDFFGTP VYHPWGLFEW
WFFFDAYAPH IFDAGGAIAA GSGLIAMVVA IGMSIWRSRQ SKLVTTYGSA RWANAEDIHK
AGLDQPAGVF LGLHRQQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWSITAGWR SRFSHCLLFN PTDAKSSAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
RRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA CPFELTLHRM MTTPHIGGGP
HLVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIAAEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIAR RHKLLLMLDE FPALGRLDFF
ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDEAVV MVSSVAPIKA
KKLRYYADSN FKRRVLPPPV LATLSMQGRY ADVPPERADD WSGLAIPAMP VAPTADAADG
LENLGSADDS GPRRQPELSE AVTYDPDLVA PAADLGLLDD DDMPHPLPRQ LDPALQRTAR
LASLDPDDGI DL
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