| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2637 |
|---|
| Symbol | |
|---|
| ID | 6288457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2750723 |
|---|
| End bp | 2752090 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642626208 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001900195 |
|---|
| Protein GI | 187929708 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCCAAA TCGACATGCA GAAGCTCGCC GACGACGCTC GCTTCAACCG CTTTCATGCC
AAGGTGCTTC TGTGGTGCCT GTTGATTCTC ATCATCGACG GCTATGACAT CGCCGTGGTG
GGCATCGCCC TGCCGTCCAT CATGCAGCAG ATGGGCGTGA ACGCATCGAC TGCCGGTTTC
ATGGCCAGTT CGGCCCTGTT CGGCATGATG TTCGGCGCCA TGGTTCTGGG CACGCTGTCC
GACCGGATTG GTCGGCGCTG GGCCCTCTCC ATTGGCGTCA TGCTGTTCAG CGTGTTCACC
GCGGCCGCCG GATTCACCAA GGATCCCATC AGCTTCAGCG TGGTGCGCTT CATCGCGGGC
CTGGGGATTG GCGGTGTGCT GCCGGTCATC GTGGCACAGA TGGTCGAGTA CTCGCCCAAG
AAGATCCGCA GCCTGATGAC GGCGCTGATG ACTTCGGGCT ACGCACTGGG CGGCATCCTG
GCCGCGGTGC TCGGCAAGCA GCTGATCGGC GAGTACGGCT GGCAGGTCGT TTTCATCGCA
GCGGGTGTGC CGGTCCTGCT GATTCCGTTC ATCTTGAAGC TGGTGCCGGA ATCAATGACC
TACCTGATCT CGCGCAGCCG CAACGGCGAA CTGGCCGAAG TGGCCCGTAA TCTCCAGCCG
GGAGTCAAGC ACCCGGCGGA CGCCCAGTTC GTCGTGCCCA CCGCCGACCG CGTGGCGGGT
GCGCCGGTCT CCCGGCTGTT CCAGGACGGG CGAGGCCCGA GCACGGTGCT GTTCTGGATC
GCCTTCTTCT CGGGCCTGTT CATGGTCTAT GCGCTCAGCA GCTGGCTGAC CAAGCTGATG
GCTATGGCTG GCTACAGCCT GGGGTCTGCC CTCAGCTTCG TGATCGCGCT GAACGTTGGC
GCCATCATCG GTGCCGTGGG AGGCGGGTGG CTCGCCGACA AGTTCAACAT CAAGTGGGTG
CTGGTGGGGA TGTATGCGCT GGGCGGCGTG CTGCTGTACC TGATGACGTT CCAGACCTCG
ACCGAGCTGC GTTATCTGAT CATCGGCGCG GTCGGCGCCT GCACCACCGG CGCGCAATTG
GTGGCCTATG CCTACTGCGG GCAGTTTTAC CCGATGTCCA TCCGCTCGAC CGGCATCGGC
ATGGCCTCCG GCGTGGGGCG CCTGGGCGCG ATCGCGGCGC CGCTGCTAAT CGGCCAGATC
GTTGCGCTTG AGCTGCCGCT GGAGCAGAAC TTCCTGGTGA TCGGGGCTTT CGGAATCATC
GGCTCGATCG CCCTGGCGTT CATCAGGCAT GGCGGCCCGG CGTCGGTGGG CCCGCAAGAG
GCTGCACGCG AGTTGCGCCC GTCGCAACAG ACGCCGCAAA ACGCCTGA
|
|---|
| Protein sequence | MCQIDMQKLA DDARFNRFHA KVLLWCLLIL IIDGYDIAVV GIALPSIMQQ MGVNASTAGF
MASSALFGMM FGAMVLGTLS DRIGRRWALS IGVMLFSVFT AAAGFTKDPI SFSVVRFIAG
LGIGGVLPVI VAQMVEYSPK KIRSLMTALM TSGYALGGIL AAVLGKQLIG EYGWQVVFIA
AGVPVLLIPF ILKLVPESMT YLISRSRNGE LAEVARNLQP GVKHPADAQF VVPTADRVAG
APVSRLFQDG RGPSTVLFWI AFFSGLFMVY ALSSWLTKLM AMAGYSLGSA LSFVIALNVG
AIIGAVGGGW LADKFNIKWV LVGMYALGGV LLYLMTFQTS TELRYLIIGA VGACTTGAQL
VAYAYCGQFY PMSIRSTGIG MASGVGRLGA IAAPLLIGQI VALELPLEQN FLVIGAFGII
GSIALAFIRH GGPASVGPQE AARELRPSQQ TPQNA
|
|---|
| |