Gene Rpic_2635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2635 
Symbol 
ID6287430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2748939 
End bp2749988 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content61% 
IMG OID642626206 
Productbeta-lactamase domain protein 
Protein accessionYP_001900193 
Protein GI187929706 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.963581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CAGCCCCGGC ACTCTCGTAT CCGTTCTCGG ATCTCCCACT CCCTGGCCAA 
GCCACGGAAA TCAAGCCTGG TGTGCTGTGG CTGCGCATGC CGCTGCCGTT TTCCCTGGAT
CACATCAACC TCTGGGCATT GAGCGACGGT CCTGGTTGGG CGGTCGTGGA CACGGGCATT
CGCAGCGTGG ACGTCAGGAA CGCGTGGCTC GCCTTGCTCG CTCCGCAGGG GCCGCTAGCC
GGCCGACCCA TCTCCCGTGT GATAGCGACG CACATGCACC CGGATCATGT GGGCATGGCG
GGATGGTTGA CACGTCGCTT CGAATGCGCG CTTTGGATGA CACGAGACGA GTATTTGAGC
TGTCGGGTGA TGCTTGCCGA TACGGGGCGG GAAGCGCCAG TCGATGGCGT TCGCTTCTAT
CGGAGGGCCG GATGGAGCGA CACCGAGGTG GATGAGTACC GCACCCGGTT CGGTGACTTC
GGTAAAATGA TCCATCCATT GCCTGACAGC TTTGTGCGGC TCACGGATGG CCAGATGTTG
CGGATCGGGG ACCAGGAATG GGAAGTCATC GTCGGCACAG GACATTCCCC CGAGCACGCG
TGCTTCTACT CGCGCGAACT GGATTTGCTG ATATCGGGGG ATCAGGTTCT TCCCAGGATC
AGTTCCAATA CCTCCGTGTA CGCCACCGAG CCGCATGCGA ATCCTCTGCA GGGTTGGCTC
GATTCCATCG ACCGGTTGAT GCAACGCGTA CCTGGGAGCG CCCTGATTCT GCCTGCCCAC
AACGAACCTT TCCATGGCCT GCACCTACGG TTGGAGCAAC TGCGTGCGAG CACCGTCAGA
GGCACCGACC GCGTCAGGCA ACAACTTGCG CAGCCTCTGA GGGTCATCGA CCTGGTTCGC
GCCCTGTACC GTTCGTCCAT TGTTGCGGAG CAAATGCACC TCAACCTCGC GACCGGAGAG
ACGCTCGCCC ACCTAAACTA TCTCGACCAG CGTGGGGAAA TCGTGTCTGC AGAAGACGAA
GACGGCGCAA TGCGCTATCG GCTCGCCTGA
 
Protein sequence
MTDAAPALSY PFSDLPLPGQ ATEIKPGVLW LRMPLPFSLD HINLWALSDG PGWAVVDTGI 
RSVDVRNAWL ALLAPQGPLA GRPISRVIAT HMHPDHVGMA GWLTRRFECA LWMTRDEYLS
CRVMLADTGR EAPVDGVRFY RRAGWSDTEV DEYRTRFGDF GKMIHPLPDS FVRLTDGQML
RIGDQEWEVI VGTGHSPEHA CFYSRELDLL ISGDQVLPRI SSNTSVYATE PHANPLQGWL
DSIDRLMQRV PGSALILPAH NEPFHGLHLR LEQLRASTVR GTDRVRQQLA QPLRVIDLVR
ALYRSSIVAE QMHLNLATGE TLAHLNYLDQ RGEIVSAEDE DGAMRYRLA