Gene Rpic_2633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2633 
Symbol 
ID6287428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2747563 
End bp2748591 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content68% 
IMG OID642626204 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001900191 
Protein GI187929704 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.929424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAC CCGTCTTCAC CGCTCCTATC TTTGCCGTGC ATGGCCTGCT GGACGGCGCG 
CGCGGCAAGG GGCTGGCCAC GCAAGAATGG CTGAAGGGCG TGCTGGGGCG CGCCGGCATC
AGCGAATCGC TGCTGGAGCT CAAGGATTCG CGCGTAACCG TGGAGCAGTT CAACGCGCTA
TTTATCGCTG TCAAGGACAG CCTGAACGAC GAGTGCCTGG GCTACCTACA TGAGCGACCC
ATGCGCCCGG GCAGCTTCGC GCTAATGGTG CGCAGCGCGT TCACTGCCCA TTCGTTGTCA
TGCGCCCTGC GTCGCCTGAG CGAATCCTTC GCCCTGCTGC AGGACGACGT GACGCTGGTG
CCCGTGACCG AGGGCGCGCT GGGGGGCTTC GCGCTGGAGA TGCGCGGCGG CCCGGGCGCA
CATGCCGAAT TCCTTCATGC ACATCTGCTG CGCGTGTTCT GGCGCTTGTT GCTGTGGCTG
CACGGCGGCC GGCTGGTGCC GCAGCGATTC GACTTCAATT TTGCGCTGCC GCTCCATGCG
ATGAGCTACG GGCGCATCTT TTCCGGCACG CTGTGCTTCG GGCAGCCGCG CACGGCCGCC
TGGTTCGACG CCGATGCCTT TAAACAGCCG GTGCGGCGCG ATCGGGACGC GCTGCAGTCC
TTCCTGCGCG CCACGCCGGG CAACGTGGTG GGGCCTTACC TGAACGAGCG CAGCGCCAGC
GCGCGGGTCC GCATGGTGCT GCAGCGGGCC AGCCCGGAAT GGCCCGACCT GGTCGTCACC
GCGCAGCGCC TGCACTTGTC GGTGAGCGCG TTGCAACGGC ACCTGGCCTC CGAGGGCACT
TCCTTCCAGG CGCTAAAGGA CCAGTTGCGG CGCGACATGG CGATCGTGCG CCTGACCAGC
AGCGAAGCCT CGCTCGTCGC CATCGCCGCC GACCTGGGCT TCACCGACAG CACCGCCTTC
CAGCGCGCCT TCAAGGTCTG GACCGGCAGC GCGCCGGGAG CCTACCGTGC CCGCTCGCGC
AGCAGGTAG
 
Protein sequence
MLQPVFTAPI FAVHGLLDGA RGKGLATQEW LKGVLGRAGI SESLLELKDS RVTVEQFNAL 
FIAVKDSLND ECLGYLHERP MRPGSFALMV RSAFTAHSLS CALRRLSESF ALLQDDVTLV
PVTEGALGGF ALEMRGGPGA HAEFLHAHLL RVFWRLLLWL HGGRLVPQRF DFNFALPLHA
MSYGRIFSGT LCFGQPRTAA WFDADAFKQP VRRDRDALQS FLRATPGNVV GPYLNERSAS
ARVRMVLQRA SPEWPDLVVT AQRLHLSVSA LQRHLASEGT SFQALKDQLR RDMAIVRLTS
SEASLVAIAA DLGFTDSTAF QRAFKVWTGS APGAYRARSR SR