| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2627 |
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| Symbol | |
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| ID | 6288236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2740659 |
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| End bp | 2741441 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626198 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001900185 |
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| Protein GI | 187929698 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.798582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTGA ACTCCGACAT CTCGGCCATC ATCACCGGGG GCGCTTCCGG CCTGGGAGCC
GCCACGACCC GGCGTTTGGC CAGCCGTGGC GTCAAAGTCG CCATCTTCGA CATGAACGAA
ACCGTCGGCC AGGCGTTGGC CAGCGAACTC GGCGGCGTTT ACTGCAATGT GGACGTGACA
TCTGAGGAGC AGGTGGACAC CGCCTTCGCC AAGGCCCGTG CGGCCATCGG GCAGGAGCGC
ATTCTGGTCA ACTGCGCCGG TACTGCCGAT GCCGTCAAGA CTGTCAGCCG CGACAAGAAA
ACCGGCGAAA TCCGCCCATG CGCGGCAGAT CGCTTCAATC GCATCATTCA GATCAACCTG
GTGGGCACCT TCCGTTGCAT CGCCAAGTCA GCCGCGGGTA TGTTGACGCT CGCGCCGCTG
ACCGATGGCG AGCGCGGCGT CATCGTCAAC ACCGCTTCGG CCGCCGCGCA GGACGGCCAG
GTCGGCCAGG CCAGCTATGC GGCCAGCAAG GCAGCCATCG TGGGCATGAC CCTGCCAATC
GCGCGCGACA TGATGGACGA AGGGATCCGG ATCAACACCA TCATGCCGGG GATCTTCGGT
ACACCGTTGC TGCTGGGTCT GCCGGACAAC GTCAAACAGG CGCTGGCGGC CAGCGTGCCC
TTCCCCAAGC GTTTAGGCGA CCCCGATGAA TTCGCGCAGG CCGTCGAGTT TCTCGTTACT
TGCGGCTACA TGAATGCCGA GTCCATTCGT GTGGATGGTG CCATTCGCAT GGCGCCGCGC
TGA
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| Protein sequence | MQLNSDISAI ITGGASGLGA ATTRRLASRG VKVAIFDMNE TVGQALASEL GGVYCNVDVT
SEEQVDTAFA KARAAIGQER ILVNCAGTAD AVKTVSRDKK TGEIRPCAAD RFNRIIQINL
VGTFRCIAKS AAGMLTLAPL TDGERGVIVN TASAAAQDGQ VGQASYAASK AAIVGMTLPI
ARDMMDEGIR INTIMPGIFG TPLLLGLPDN VKQALAASVP FPKRLGDPDE FAQAVEFLVT
CGYMNAESIR VDGAIRMAPR
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