| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2625 |
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| Symbol | |
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| ID | 6288234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2737800 |
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| End bp | 2739782 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642626197 |
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| Product | hypothetical protein |
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| Protein accession | YP_001900184 |
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| Protein GI | 187929697 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.324937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC GCCGCGACGA CGATTTCCGC ATCCGTCCCA GCGCCCCGAA GAACCGGGGC
CAGAGCTTCG TCTCCAAGGT ACTCAAGCAG GCGGGCAAGG CCAGCGGCGG TAAGTCCTCG
GTGCGCCGTC CTGGTGGCAG TAGCAAGAGT GCCGGCTCCG GCCAGCGGCC CGGCTCACGC
TTGGGACGCG GCCACACGGC GGCGCGCTTC GCGGGGGCGA AGCTCACGTC CATGTCGCGG
CGTGTGACCA TCAAGACGCT GCTGCTCAAT CAGCACCGAG CCAGCCCGCA GTCGCTTGCC
AAGCACCTGC GCTATATCGA GCGCGATGGT GTGGGCCGCG ATGGCGAGTC GGGCCAAGCC
TACGGGCCGC AGACCGATGC CGCCGACCTC GATGCGTTCA AGGAACGCTG CGCCGACGAC
CGGCATCACT TCCGCTTTAT CCTTTCGCCC GAAGATGGCG CGGAGCTGGA AGACCTGCGC
ACCTATACCC GGCACCTCAT GGGTCGCATG GAGGCCGACC TTGGCACGGG CCTCGATTGG
GTGGCCGTCA ATCACTGGAA CACCGACAAC CCGCACACGC ACATCGTCGT GCGCGGGCGC
GACGACACCG GCAAAGACCT CATCATCGCG GGCGACTACA TCGCCGATGG GTTCCGCCAT
CGCGCCGCCG AACTGGCGAC CGAATGGCTG GGGCCGCGCA CCGAGCTGGA GATCCAGCAG
ACCTTGCGGC GCGAGGTGGA TCAGGAGCGG TGGACGAGCC TGGATCGCAC CTTGAAGCGC
GAGGCCGGCG ACGATGGCAT GGTGCATGTC GAACGGCTCA ACGAACCCCG ACTGCAACGC
CAGCGTCTGC TGCTGATCGG CAGGTTGCAG CGTTTGCAGC GCCTGGGCCT GGCCGACGAG
GCCCAGCCCG GCACGTGGAC CGTCCACAAC GATGCGGAAA AGACCCTGCG CGCCCTGGGC
GAGCGCGGCG ACATCATCCG CACCATGCAG CGGGCCATGC GCGGCGAGCC ACGCGAACTG
GCGGTGTTCG AGCCTGGGGA CGATGGCCGA ACCATCCTCG GCCGCGTGGC CGCGAAGGGG
CTGGCCGACG AACTGCACGA CCGGGGCTAT CTGGTCATCG ACGGCGTGGA CGGCAAGGCC
CACTACGTTG CGCTCAACGC CCGCGACGAG CTGGCGAACT ATCCGACCGG CGCCGTGGTG
GAGGCAAGGA GATCGGCTGA CGTGCGCGCG GCCGACAAGA ACATCGCCGC GTTGGCGAGC
GATGGCCTGT ACCGCACCGA CCACCACCTT GCCATCGCGC AGGGTCAGGC CGTGCCCGGC
CGCGATCCGC AGGAAGTGGT CGCGTCCCAC GTCCGCCGGC TGGAAGCCTT GCGCCGTGCC
GGTATCGTGG AACGGGTGGC CGAGGGGCTA TGGAAGGTGC CGGACGACTT GCCCGAGCAG
GGCCGTCGCT ACGATGCGCA GCGCCTGGGC GGCGTGGCGG TGGAGCTGAA ATCGCACCTG
CCCATCGAGC GGCAGGCCCG CGTGATCGGA GCCACCTGGC TCGACCAGCA GTTGATCGGC
GGCGGCTCGG GCCTGGGCAA CCTGGGCTTT GGCAGCGAGG TCAACCAGGC GATGCAGCAG
CGCGCCGAAT TCCTGGCCGA ACAGGGGCTG GCAGAGCGGC GCGGGCAGCG CGTAATCCTC
GCGCGCAATC TATTGGCGAC ACTACGCGAT CGGGATGTGA TTCGGGCTGC CAAGGATATT
GCCACCGAAA CCGGGCTGGA ACACCGTCTG GCGGCCGATG GCCAGCGCGT GACCGGCATC
TACCGGCGCA GCCTCATGCT CGCCAGTGGC CGCTTTGCCA TGCTCGATGA TGGTATGGGG
TTCAGCTTGG TGCCATGGAC GCCGGTCATC GAACAACGAC TCGGCATGCT GATTTCTGGG
CAGGTACATG GTGGCACCCT ATCCTGGCAA ATCCGACGGC AGCAGGGTTT ATCCGTTACC
TGA
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| Protein sequence | MTDRRDDDFR IRPSAPKNRG QSFVSKVLKQ AGKASGGKSS VRRPGGSSKS AGSGQRPGSR
LGRGHTAARF AGAKLTSMSR RVTIKTLLLN QHRASPQSLA KHLRYIERDG VGRDGESGQA
YGPQTDAADL DAFKERCADD RHHFRFILSP EDGAELEDLR TYTRHLMGRM EADLGTGLDW
VAVNHWNTDN PHTHIVVRGR DDTGKDLIIA GDYIADGFRH RAAELATEWL GPRTELEIQQ
TLRREVDQER WTSLDRTLKR EAGDDGMVHV ERLNEPRLQR QRLLLIGRLQ RLQRLGLADE
AQPGTWTVHN DAEKTLRALG ERGDIIRTMQ RAMRGEPREL AVFEPGDDGR TILGRVAAKG
LADELHDRGY LVIDGVDGKA HYVALNARDE LANYPTGAVV EARRSADVRA ADKNIAALAS
DGLYRTDHHL AIAQGQAVPG RDPQEVVASH VRRLEALRRA GIVERVAEGL WKVPDDLPEQ
GRRYDAQRLG GVAVELKSHL PIERQARVIG ATWLDQQLIG GGSGLGNLGF GSEVNQAMQQ
RAEFLAEQGL AERRGQRVIL ARNLLATLRD RDVIRAAKDI ATETGLEHRL AADGQRVTGI
YRRSLMLASG RFAMLDDGMG FSLVPWTPVI EQRLGMLISG QVHGGTLSWQ IRRQQGLSVT
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