| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2607 |
|---|
| Symbol | |
|---|
| ID | 6289430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2723038 |
|---|
| End bp | 2724108 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642626179 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001900166 |
|---|
| Protein GI | 187929679 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.745873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACT ACTTCGAGAT CGACTTTCTT GGCGTCGAAA CAGCGAAAAG CGGGGACGCG
ATCACGCTGC GCTACTCGGT GAATGGCACC GAGGGCGTGC ACGTTGTTGA CGGTGGGTAT
CTGGATACGG GTGATCAGAT AGTCGAGCAT CTGAAGACGT ACTATGGAAC AACAGTCATC
GACCATGTGA TCCTCACGCA CCCAGATCGC GATCACGCCA ACGGACTACG AAAAGTCCTG
GAGCAATGCA CGGTCAGGAA TCTTTGGATC AACCGGCCGT GGATATACGC GGACCAGTTG
ATCGATCGCT TTGAGACCTA TGAATCGGTT GAAGCCCTGC GACGGAAGTT GCGCTCAATC
TACGATGCCA CGGCAATTCT TGAGGATATT GCGGTGGAGA AGGGAATTCC AATCCATGCC
CCCCTTCAGG GGCAGAGCAT CGGTCCGTTC GCGGTCATGG CACCTACCCT GGGGCGCTAC
TTGGACCTGA TCGTGGACTC CGCGAAGACA CCGGAAGCTG TCGAAGAAAG TGCTTTTGAT
AGCGCGCTGA GCAGCATATT CCGGGCAGTG AAGGCCGCGA CCGCCTACAT CAAGTCCCTG
TGGGGCGAGG AATATTTCCC GCCTGAGCCG ACCAGTCGTG AGAATGAAAT GAGTGTGGTG
CAGTCGGCTG TCTTGAACGG TCATCGCGTC ATGCTTACTG GCGATGCCGG GCGTGAAGCA
CTGCAGGAGG TGATCGACTA CGCACCTTTC GTGGGACTCG CGCTGCCAGG TATTCGGTAT
TTCCAAGTGC CCCATCACGG CGGGCGACAC AACGTTTCGA CCGAAGTCTT GGATCAACTG
CTCGGCCCAC GGTTGAACAG TATGCCGGAC AAGCACCATT GGAATGCCAT ATGCAGTTCT
GCCAAGGCGG ATGAGGATCA TCCGCGGAAG TCGGTGATTC GCGCCGTATT GCACCGGGGT
GGGCACTGGG CGGCAACTGA AAGCCAGAAC ATACGCATCG GGGCAGGCAT CACCCGCGAT
GGCTGGGTGC CGATTCCCCA GGCGGCGTAT CCGGAAGATC AAGAAAATTG A
|
|---|
| Protein sequence | MADYFEIDFL GVETAKSGDA ITLRYSVNGT EGVHVVDGGY LDTGDQIVEH LKTYYGTTVI
DHVILTHPDR DHANGLRKVL EQCTVRNLWI NRPWIYADQL IDRFETYESV EALRRKLRSI
YDATAILEDI AVEKGIPIHA PLQGQSIGPF AVMAPTLGRY LDLIVDSAKT PEAVEESAFD
SALSSIFRAV KAATAYIKSL WGEEYFPPEP TSRENEMSVV QSAVLNGHRV MLTGDAGREA
LQEVIDYAPF VGLALPGIRY FQVPHHGGRH NVSTEVLDQL LGPRLNSMPD KHHWNAICSS
AKADEDHPRK SVIRAVLHRG GHWAATESQN IRIGAGITRD GWVPIPQAAY PEDQEN
|
|---|
| |