Gene Rpic_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2602 
Symbol 
ID6289868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2716578 
End bp2717714 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content64% 
IMG OID642626174 
Productprotein of unknown function DUF1016 
Protein accessionYP_001900161 
Protein GI187929674 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.684021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA AGGCGCCTGC GATGGCGGGA GTCGCACCCG CCGCCGTGCC TGCCGGCTAC 
GCCAGCATCC ACGGCGGCAT CGTGGATCTG CTCGATGCCG CGCGCCAGAC GGCAGCGCGC
AGCGTCAATG CGCTGATGAC GGCCAGCTAC TGGGAGATTG GCCGCCGCAT CGTGGAGGCC
GAGCAACAGG GCAAGCGGCG CGCGGGTTAT GGCGAGCAGT TGATCGAGCG GCTGGCAAGC
GACCTCACCC AGCAGTTCGG CCGTGGCTTC AGCCGTCAGA ACCTGCAGCA GATGCGGTCG
TTTTTTCTGA CCCGGCCAAT TCGCCAGACA GTGTCTGGCG AATCTTCCCC GGAGCCAGTG
CGGCCTTGGC GGCTGGACGA GCTGGCGCAG GTCTTCACGC TGCCGTGGTC GGCCTATGTG
CGGCTGTTGT CGGTCAAGGA CGAGCATGCG CGCCAGTTCT ATGAAGCCGA GGCCTTGCGC
GGCGGCTGGA GCGTGCGCCA GTTGGATCGG CAGATCGGCA GCCAGTTCTA CGAGCGCACG
GCGCTGTCGA AAAACAAGGC GGCGATGCTG GCCAAGGGCG CGGTGGCCAA GCCCGAAGAT
GCCGTCGCGC CCGGCGATGC CATCAAAGAC CCCTATGTGC TGGAGTTCCT CGACCTCAAG
GACGAGTATT CGGAGTCCGA TCTGGAGGCC GCCTTGATCC GGCGGCTGGA AGACTTCCTG
CTCGAATTGG GTGAAGGGTT CACCTTCATT GGACGGCAGC GGCGCTTGCG CATCGACCAG
ACCTGGTATC GGGTGGACTT GCTGCTGTTC CATCGCAAGT TACGCTGCCT GGTCATCATC
GACCTGAAGC TGGGGAGTCT GACGCATGCG GACGTAGGCC AGATGCACAT GTACTGCAAC
TATGCCAAGG AACACTGGGC CTATCCCGAG GAGAACCCGC CGGTGGGGCT GATTCTTTGT
GCCGACAAGG GGCTCGCCCT GGCGCGGTAT GCGCTGGAGG GCTTACCCAC CAAGGTCATG
GCGGCGAACT ACCGGATGGT TCTGCCGGAT ACCGATGTGC TGCAAAAGGA ACTGGAAAGC
ACGCGGCTCT TGCTAGAGTC TCGCGGAACG ATTCGTCCCA AGACGTGGAA GCGGTAG
 
Protein sequence
MTKKAPAMAG VAPAAVPAGY ASIHGGIVDL LDAARQTAAR SVNALMTASY WEIGRRIVEA 
EQQGKRRAGY GEQLIERLAS DLTQQFGRGF SRQNLQQMRS FFLTRPIRQT VSGESSPEPV
RPWRLDELAQ VFTLPWSAYV RLLSVKDEHA RQFYEAEALR GGWSVRQLDR QIGSQFYERT
ALSKNKAAML AKGAVAKPED AVAPGDAIKD PYVLEFLDLK DEYSESDLEA ALIRRLEDFL
LELGEGFTFI GRQRRLRIDQ TWYRVDLLLF HRKLRCLVII DLKLGSLTHA DVGQMHMYCN
YAKEHWAYPE ENPPVGLILC ADKGLALARY ALEGLPTKVM AANYRMVLPD TDVLQKELES
TRLLLESRGT IRPKTWKR