| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2597 |
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| Symbol | |
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| ID | 6287372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2711130 |
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| End bp | 2712917 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626169 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001900156 |
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| Protein GI | 187929669 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.837679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.491309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCT CCAATCGACC ATCGCGACCG TCACGACCAC CACGCTTTCG TTTCCTGGGT
TTGCCCGCCG CCGCGCTGGC GGCAGGCTTT GTGCTGTCCC TCGCCTGTGC CGCGGCGCAC
GCTGAATACG ACGTCAAGAT CGATGCGCCG AAGTCCATTC GCGACTTGCT GGAGCGCCAT
CTGGACCTGT CGCGCTACAA AGACCGCAAG GACATCACTG ACGACCAGCT CCAGTACATG
GTCGAGACCA TTGGCGACCA AGTCACCAAG CTGACGGCCA CCGAAGGCTA TTTCGTGCCG
AAGGCGACCG CGAAGCTGGA CGGCCCGCCG GACCACCGCG TGGTCAATGT GAAGGTCGAG
CCCGGCCCGC GTACCACCAT CGACACCGTG GCGCTCGACT TTACCGGGGC CATCACGCAA
GACGCCAAGC GCATCGACGA ATTGAAAAAG TCGTGGAGCC TGCAGCACGG CATGGCCTTC
CGCCAGTCGG GCTGGGACAA GGCCAAGGAC GACGGTCTGG CGGCGCTGCA GAGCAAACGT
TATTACGCGG CCAGGCAGAC ATCGTCGCAG GCGCGTGTCG ATCCGGACGA AAACAAGGCA
GACCTGTCGG TGGGCTATGA CAGCGGTCCG GCTTACACGC TGGGGCCACT GGAGGTGCAG
GGCTTGTCGC GTTATCCGCT CAGCATCATC AACCACGTGA ACCCGCTGCG CGTGGGTGAG
GATTACTCTG CTGATCGTCT GCAATCGCTG CAGGCCGCCA TCCAGGGGCA GCCATATTTT
TCCAATGCGA TCGTCGACCT GGGTGACGAT CCGAAGAACC CGGTCAACGC GCCGGTGCGG
GTGCGCGTGC GGGAGTACCC GCCCAATCGC ATCACCGGCG GTGTGGGTTA CGGCACGGAC
ACGGGCGCCT CGCTGGAAGG GCGCTATCAA TATCTGAACC TGTTCAGCAA GGCGTGGGTG
CTCGACACGC AGGCCCGCAT CGAACAGCGC CGTCAGTACC TGTTTGCCGG CGTGACCGTG
CCGCCCGACG ACAAGCAATA CGTCAATAGC TTCTACACCA GCATGGACCG CACCGATACC
TCGGGCACCG ACACGCGCAG CTATCGTTCC GGCTTCAAGC AGACGCGTGT GCGCGGCATC
TATGAGACGT CGTTCACCGT TGATTTCTAC TACGACGACC TGCGGCCCGA CGGCGCCGAG
CGTCAGTTGA GCAAGGCGCT CGTCCCGGGT TTCGCGTGGA CGCGCCGTGA CGTGGACGAC
CCGCTGTTCC CGCGCCGCGG CAACATCATC ACCACGCAGA TCGGCGCGGC AGTGAAAGGC
GTGTTGACGG ACCAATCGTT CGTGCGGTCG TACAGCCGCA TCCGCCAGTT CGTGCCGGTG
GGGCAGCGCG ATATCTTCGT CGCGCGCGGT GAGTTGGGTG CGGTCATCAC CGCTGGTTCC
GGCGACGGCG TGCCGGCCAC GCTGCGCTTC CGCACGGGCG GCACACAGTC GGTGCGCGGC
TACGACTTCC AGAGCATCGG TAACGACGTC AACGGCAGCA CGCTGCCGAC CAAGTTCCTC
GTCACTGGCG GGTTGGAATA TCAACGCTGG TTTCTGCCGC AATGGGGTGC CGCCGTGTTC
TGGGATACCG GCACGGCCAC CGACAACTGG TCGGAGCGCC GCTGGTTCAA CGGTGTGGGT
GTCGGCGTGC GCTGGAAGAG TCCGGTCGGG CCGATCCAAC TCGATATGGC CTATGGCATC
CAGCAGAAGC AGTTCCGGCC GAGCGTGTCG CTGGGCATCG CGTTCTGA
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| Protein sequence | MTGSNRPSRP SRPPRFRFLG LPAAALAAGF VLSLACAAAH AEYDVKIDAP KSIRDLLERH
LDLSRYKDRK DITDDQLQYM VETIGDQVTK LTATEGYFVP KATAKLDGPP DHRVVNVKVE
PGPRTTIDTV ALDFTGAITQ DAKRIDELKK SWSLQHGMAF RQSGWDKAKD DGLAALQSKR
YYAARQTSSQ ARVDPDENKA DLSVGYDSGP AYTLGPLEVQ GLSRYPLSII NHVNPLRVGE
DYSADRLQSL QAAIQGQPYF SNAIVDLGDD PKNPVNAPVR VRVREYPPNR ITGGVGYGTD
TGASLEGRYQ YLNLFSKAWV LDTQARIEQR RQYLFAGVTV PPDDKQYVNS FYTSMDRTDT
SGTDTRSYRS GFKQTRVRGI YETSFTVDFY YDDLRPDGAE RQLSKALVPG FAWTRRDVDD
PLFPRRGNII TTQIGAAVKG VLTDQSFVRS YSRIRQFVPV GQRDIFVARG ELGAVITAGS
GDGVPATLRF RTGGTQSVRG YDFQSIGNDV NGSTLPTKFL VTGGLEYQRW FLPQWGAAVF
WDTGTATDNW SERRWFNGVG VGVRWKSPVG PIQLDMAYGI QQKQFRPSVS LGIAF
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