Gene Rpic_2594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2594 
SymbolmetG 
ID6288312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2704334 
End bp2706466 
Gene Length2133 bp 
Protein Length710 aa 
Translation table11 
GC content62% 
IMG OID642626166 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001900153 
Protein GI187929666 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.156229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAT CCGCGCGCCG CGCCCTGTTC GCGGCCCGCC CGCACCTTTC TGGCCTGCCC 
ATGTCCGAAC GTCGCATCCT CGTCACTTCC GCCCTGCCTT ATGCCAACGG GCCGATCCAT
ATCGGCCACC TGGTCGAGTA CATCCAGACC GATATCTGGG TACGCTTCCA GCGCATGCGC
GGTCATGAGA CCTACTACGT GGGTGCCGAC GACACGCACG GCACGCCCGT CATGCTGCGC
GCCGAGAAGG AAGGCCTGAC CCCGCGCCAG CTGATCGAAC GCGTCTGGAC GGAACATAAG
CGCGACTTCG ACAACTTCCT GGTCTCGTTC GACAACTACT ACAGCACCGA CTCCGACGAA
AACAAGGAGC TGTGCCAAAA CGTCTACCTC AAGCTCAAGG AAGCCGGCCT GATCGACGTG
CGCGAGGTCG AGCAATTCTA CGACCCGGTC AAGGAGATGT TCCTGCCAGA CCGCTTCATC
AAAGGCGAAT GCCCGAAGTG CGGCGCGAAA GACCAGTACG GCGATTCGTG CGAAGTCTGC
GGCGCAACCT ACCAGCCGAC CGACCTGAAG AACCCATACT CCGTGGTGTC GGGCGCGACC
CCGGTGCGCA AGTCGTCGGA ACACTACTTC TTCAAGCTGT CCGACCCGCG CTGCGAGAAC
TTCCTGCGCG ACTGGGTGGC CGACCTGGCC CAGCCCGAAG CCACCAACAA GATGCGTGAA
TGGCTCGGCG AGGAAGGCGA GGCCAAGCTC TCGGACTGGG ACATCTCGCG TGATGCGCCG
TACTTCGGTT TCGAAATTCC GGGCGCCCCG GGCAAATACT TCTACGTGTG GCTGGATGCG
CCGGTCGGCT ACTACGCCAG CTTCAAGAAC CTGTGCGCCA AGCGCGGCCT GGATTTCGAC
GCGTGGATCA ACGAACACTC GACCACCGAG CAGTACCACT TCATCGGCAA GGACATCCTC
TATTTCCACA CGCTGTTCTG GCCGGCGATG CTGAAGTTCT CCGGCCACCG CACGCCAACC
AACGTGTTCG CCCACGGCTT CCTGACGGTG GACGGCGCGA AGATGAGCAA GTCGCGCGGC
ACGTTCATCA CTGCGCAAAG CTACATCGAC ACCGGCCTGA ACCCAGAATG GCTGCGCTAC
TACTTCGCGG CCAAGCTGAA CGCGACGATG GAAGATCTGG ACCTGAACCT GGACGATTTC
ATCGCCCGTG TGAACAGTGA TCTGGTGGGC AAGTTCGTCA ACATCGCCAG CCGCTCGGCG
GGCTTCCTGG TCAAGCGCTT CGAAGGCCGC GTGAGCGACG CCGCGCTGGG CCATCCGCTG
ATGGTGCAAC TGCGCGAAGC CGCCCCGCAA ATCGCCGATC TGTACGAGAA GCGCGAGTAC
AGCAAGGCAC TGCGTGCCGT CATGGAACTG GCCGATGCCG TCAACGCCTT CGTCGACACC
GAGAAACCGT GGGATCTGGC CAAGGATGAA GCCAACCGCG AAAAGCTGCA CGCCGCATGC
TCGGTCGCGC TGGAAGCGTT CCGCCTGCTG GCCGTGTACC TCAAGCCGAT TCTGCCCACC
ACGGTCGAGC GCATCGAAGC GTTCCTCAAC GTTGAGCCGC TGACGTGGCG TTCGATCGAT
TCGCAGCTCT CGTCGGATAA GCCGATCCAG CCGTACTCCC ACCTGATGAC GCGCGTGGAC
AAGAAGCAGG TGGATGCGCT GGTGGAGGCA AATCGTCAGT CGCTGCAGGC CACCGCAGAA
GCCCCGGCTG CTGCCGCCGC CAACGGTGCT GCCGCCATTG AGCCGATGGC CGACACCATC
ACCATCGACG ACTTCGCCAA GATCGACTTG CGTGTCGCCA AGATCGTCGC CTGCCAGCGC
GTGGAAGGAT CGAACAAGCT GCTGCAGCTG ACGCTGGATG TGGGCGAAGG ACAGACGCGG
AATGTGTTTT CGGGTATCCA GTCGGCATAT GCGCCGGAAG ATCTGGTGGG CAAGCTGACC
GTGATGGTTG CCAACCTGGC ACCGCGCAAG ATGAAGTTCG GGATGTCGGA AGGGATGGTG
TTGGCGGCTT CGGCTGCCGA TGAGAAGGCT CAGCCTGGGC TTTATATTCT TGAGCCGCAT
TCTGGGGCGG TGCCGGGGAT GCGGGTGCGG TAA
 
Protein sequence
MRLSARRALF AARPHLSGLP MSERRILVTS ALPYANGPIH IGHLVEYIQT DIWVRFQRMR 
GHETYYVGAD DTHGTPVMLR AEKEGLTPRQ LIERVWTEHK RDFDNFLVSF DNYYSTDSDE
NKELCQNVYL KLKEAGLIDV REVEQFYDPV KEMFLPDRFI KGECPKCGAK DQYGDSCEVC
GATYQPTDLK NPYSVVSGAT PVRKSSEHYF FKLSDPRCEN FLRDWVADLA QPEATNKMRE
WLGEEGEAKL SDWDISRDAP YFGFEIPGAP GKYFYVWLDA PVGYYASFKN LCAKRGLDFD
AWINEHSTTE QYHFIGKDIL YFHTLFWPAM LKFSGHRTPT NVFAHGFLTV DGAKMSKSRG
TFITAQSYID TGLNPEWLRY YFAAKLNATM EDLDLNLDDF IARVNSDLVG KFVNIASRSA
GFLVKRFEGR VSDAALGHPL MVQLREAAPQ IADLYEKREY SKALRAVMEL ADAVNAFVDT
EKPWDLAKDE ANREKLHAAC SVALEAFRLL AVYLKPILPT TVERIEAFLN VEPLTWRSID
SQLSSDKPIQ PYSHLMTRVD KKQVDALVEA NRQSLQATAE APAAAAANGA AAIEPMADTI
TIDDFAKIDL RVAKIVACQR VEGSNKLLQL TLDVGEGQTR NVFSGIQSAY APEDLVGKLT
VMVANLAPRK MKFGMSEGMV LAASAADEKA QPGLYILEPH SGAVPGMRVR