| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2589 |
|---|
| Symbol | |
|---|
| ID | 6287776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2698805 |
|---|
| End bp | 2700964 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642626161 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_001900148 |
|---|
| Protein GI | 187929661 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.131272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAC TGCTCTGCAG TTGCAATCAC ACCATGCCGA TCGATGCCGA TGCGGTGGGC
GACGCCCTGC GCGCGTCTGA CGCCGCTATC GACGCCCCCA GCAAGACGCA CCACCTGCTG
TGCCGCCGCG AGATCAGCGC GTTCACACAG GCGCTGGATG GTACGGAAGA CGTCGTTGTT
GCCTGCACGC AGGAAAAGGC GCTGTTTGCA GAAGTGGCCG CGCAGCATGA GGGTGTGACC
GCACCGATCC ATTTCGTCAA CGTGCGCGAA ACGGGCGGGT GGTCGGCAGG CGCTAAACGC
GATGCGCGCG GTTTCCGTGC CAAGACAGCG GCGCTGCTGG CCGTCGCTGG CTTGCCGGCG
CCGGAGCCAG TGCCGGTGGT CGACTACCGC TCCGACGGCA ACGTGCTGAT CATCGGTCCT
GCCGAGCGTG CCATGCCGTG GGCGGAACGG CTGGCCGACC AACTGAGCGT GGCGGTGCTC
GTCACCGGGC GCGATCGCGC AAGTGGTCCG TTTGTCCCGC CGATGGAGCG CCGCTGGCCG
GTCCACGCGG GCGAGCTGGC GCAGGTGAAC GGCTGGCTTG GTGCGTTCGA GGTGCAATGG
CGCAACCGCA ACCCGATTGA CCTGGACCGC TGCACGCGCT GCAACGCCTG CATCGATGTC
TGCCCGGAAG GCGCCATCGA CGCGCTGTAC CAGATCGATC TGGATGCATG CCGCGACCAT
CGCGCGTGCG TCAAGGCGTG CGGCGATGCA TTGGCCATCG ATTTCAGCCG CGTGGACGCA
CCGCAGGCGC TATCGGGCCA ATTCGACCTG ATCTTCGATC TGAACGATGC GCCGGCGTTT
GCCCAGCACC AGCCGCCGCA GGGCTACTTC CATGCGGGCG CAGACGCGGG CCGCCAACTG
ACGGCATCGC TGGCGTTGCT GCAAATGGTG GGGGAGTTTG AGAAGCCCAA GTTCTTCCAG
TACAAGGAAT CGATCTGCGC GCACGGGCGT AACGGCCAAG TGGGCTGCAA CGCTTGCGTG
GACGTGTGTT CGGCGTCGGC GATTGCGTCG CAGTGGAAGG ACGGCCGCGG CAGCGTGCAC
GTCACGCCCA ATCTCTGTGT GGGCTGCGGT GCGTGTACGA CCGCGTGTCC CACCGGCGCC
ATCACCTATG CCTATCCGAG CGCGCCGTAC CAGGGGCGCA AGCTGAAGAC GCTGCTCGGC
ACGTATGCAT CGGCGGGTGG GCGTGATGCC GTGGTTCTGC TGCATAACGG TGGGCGGGGC
CGCACGCTGA TCGAGCAACT GGGCCGTGCC GCGCGTATCG GCAAGGCCCA GGGCGTGCCG
GTGAATGTGC TGCCCGTCGA GGTCTTCCAT GCGGCATCGA CGGGATTGGA CCTGTGGCTC
TCCGCATTGG CTTACGGCGC CGCGCGCATC GCCATCCTGC TGACGGAAGA CGACGCGCCG
CAGTACCGCG CGATGCTCGC CGAGCAGGTT GCCGTGGCGC AGGCGGTTCT GCAGGGGCTG
GGTGAACCGG CAGACGGGGC GGGTGTGGTG CTGATCGACG TGGCGGATGC GGCGGCGCTT
GATGCACGCT TGAGCCACGC CGACGTGTCG GGCCCGGTGC GCGGCTTTCG CCGTGATATG
CCGGCGGCCA CCTTTGCGGT GGCCGCTGCC AAGCGCGAGG CACTCGATTT CGCGCTCGAC
CATCTTGCAC GCCACGCCAA GGCCACCGAG GCCATCATCC CGCTGCCAGC CGGTGCGCCG
TTTGGCGCCA TCACCGTGAA CCGCGAACGC TGCACGCTGT GCATGGCGTG CGTGGGCGCG
TGCCCGTCGC AGGCGCTGCG CGATCAGGCC GAGCGGCCCG TGCTGGCCAT GATCGAGCGC
AACTGCGTCC AATGCGGCCT GTGCGAGACC ACGTGCCCTG AAAGCGCCAT CGCCCTCGTG
CCGCGTTTGA ACCTGTCGGC AGAAGCCCGC CAATCGGCCA CGCTCAACGA GGCGCAGCCG
TTCCACTGCA TCCGCTGCAA CAAGCCGTTC GGCACCGCGC AGATGGTCGC GACGATGCTG
GCCAAGCTGG GCGCGCATCC GGCGTTCTCC GGCGCCGCCG CCGAGCGCCT CAAGATGTGC
AGCGATTGCC GCGTGATCGA CATGATGCAG CACGGCGAAC GCCCGGGCGC CCCGCACTGA
|
|---|
| Protein sequence | MPTLLCSCNH TMPIDADAVG DALRASDAAI DAPSKTHHLL CRREISAFTQ ALDGTEDVVV
ACTQEKALFA EVAAQHEGVT APIHFVNVRE TGGWSAGAKR DARGFRAKTA ALLAVAGLPA
PEPVPVVDYR SDGNVLIIGP AERAMPWAER LADQLSVAVL VTGRDRASGP FVPPMERRWP
VHAGELAQVN GWLGAFEVQW RNRNPIDLDR CTRCNACIDV CPEGAIDALY QIDLDACRDH
RACVKACGDA LAIDFSRVDA PQALSGQFDL IFDLNDAPAF AQHQPPQGYF HAGADAGRQL
TASLALLQMV GEFEKPKFFQ YKESICAHGR NGQVGCNACV DVCSASAIAS QWKDGRGSVH
VTPNLCVGCG ACTTACPTGA ITYAYPSAPY QGRKLKTLLG TYASAGGRDA VVLLHNGGRG
RTLIEQLGRA ARIGKAQGVP VNVLPVEVFH AASTGLDLWL SALAYGAARI AILLTEDDAP
QYRAMLAEQV AVAQAVLQGL GEPADGAGVV LIDVADAAAL DARLSHADVS GPVRGFRRDM
PAATFAVAAA KREALDFALD HLARHAKATE AIIPLPAGAP FGAITVNRER CTLCMACVGA
CPSQALRDQA ERPVLAMIER NCVQCGLCET TCPESAIALV PRLNLSAEAR QSATLNEAQP
FHCIRCNKPF GTAQMVATML AKLGAHPAFS GAAAERLKMC SDCRVIDMMQ HGERPGAPH
|
|---|
| |