Gene Rpic_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2583 
Symbol 
ID6286679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2692414 
End bp2693577 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID642626155 
Productformate dehydrogenase, gamma subunit 
Protein accessionYP_001900142 
Protein GI187929655 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.959541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.367632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACTT CCTGGAAACA TCTTGTGATG GCCGTGCTGC TCGGCGGCGC GGCGGCGTGG 
GCGAGCGCGC AGCAGCCGGC CAGTGCGCCG GCAGCCAACC ATGCCCCGGT CAATCCGGCC
GTACAAACGG CCCAGCCGTT CTCCAACATC GTCTCGGAGA ACGTGTTTGA TCTGCAGAAG
CGCGATCTCG CCAAAGAGGC GCAGGACCAG GCCGCACGGC GCGCGACGCA ACCGGGCAAC
AACGCGCCCG TCTGGCGCGA GGTGAACTCC GATCAGGCGC ACTACGCCAG CATTCCCGGG
CTGGAAGCCG GCGTGCTGAT CCAGCGCACC GGGCAGAAAT GGCGGCTGTT CCGCAATGGC
GTGATCACCG TGTGGGGCGG TTGGCTCATG GTGCTGGTGC CGTCGGCCAT CCTGGCCTTC
TTCCTTTGGC GCGGCATGAT CCCGCTAAAA GAAGCGCCTA CGGGCCGCAA GATCGAGCGC
TTCACGCCCA CCGAGCGCTA CGTGCACTGG ACGATGGCGA TCTCCTTCGT CACGCTCGGC
GTGTCGGGCA TCGTCATGCT GTGGGGCAAG CATTTCCTGT TGCCGATCCT CGGTCATCAG
TTGTTCGGCT GGCTGACGTA TTTGCTGAAA AACCTGCACA ACCTGGTGGG CCCGCTCTTC
ACGGTCAGCA TCATCGTGGC CTTCGTGATT TGGGTGCGGG ACAACCTGCC GCGCCAGGGC
GACGTGAAAT GGCTGCTGAG CCTGGGGGGC ATGTTTGCCG GAGAGCACGG CGCCGAAGTG
CCGTCGCACC GCTTCAATGC GGGCGAGAAA CTCTGGTTCT GGGGCGGGCT CGTCGTGTTT
GGGCTGATCC TGTCGGCTTC GGGCTGGACG CTCGATCGCA TCGTCCCGGG CGTGGATTAC
TACCGCAGCA CGATGCAACT GGCCGAGGTC ATTCACGCGA TCGCGGCGGT GGGCATGATG
AGCATGTCGC TGGGCCACAT CTACATGGGC ACGATCGGCA TGGAAGGCGC TTACCGCGCC
ATGCGTGACG GTTATGTCGA CGAGGCCTGG GCGAAGGAGC ACCACGAACT TTGGTACGAC
GACGTCAAGG CCGGCAAGAT TCCCGCGCAG CGGTCCCAGC CGCCCGCGCC GCCGGCGCCG
AGCGAGCAGC CCGCCAAGTC ATGA
 
Protein sequence
MGTSWKHLVM AVLLGGAAAW ASAQQPASAP AANHAPVNPA VQTAQPFSNI VSENVFDLQK 
RDLAKEAQDQ AARRATQPGN NAPVWREVNS DQAHYASIPG LEAGVLIQRT GQKWRLFRNG
VITVWGGWLM VLVPSAILAF FLWRGMIPLK EAPTGRKIER FTPTERYVHW TMAISFVTLG
VSGIVMLWGK HFLLPILGHQ LFGWLTYLLK NLHNLVGPLF TVSIIVAFVI WVRDNLPRQG
DVKWLLSLGG MFAGEHGAEV PSHRFNAGEK LWFWGGLVVF GLILSASGWT LDRIVPGVDY
YRSTMQLAEV IHAIAAVGMM SMSLGHIYMG TIGMEGAYRA MRDGYVDEAW AKEHHELWYD
DVKAGKIPAQ RSQPPAPPAP SEQPAKS