Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2579 |
Symbol | dcd |
ID | 6286360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2689692 |
End bp | 2690258 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642626151 |
Product | deoxycytidine triphosphate deaminase |
Protein accession | YP_001900138 |
Protein GI | 187929651 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0717] Deoxycytidine deaminase |
TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.425802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.125537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA AATCCGACAA GTGGATCCGC CGCATGGCAG AGCAGCACGG CATGATCGAG CCGTTCGAGC CCGATCAGGT GCGCGAATCC GATGGGCGCC GCATCGTTTC CTACGGCACG TCGAGCTACG GCTACGACAT CCGCTGCGCC GACGAATTCA AGATCTTCAC CAACATCAAC AGCACCATCG TCGATCCGAA GAACTTCGAC GAGAAGTCGT TTGTCGACTT CAAGGGCGAT GTGTGCATCA TCCCGCCGAA CTCGTTCGCG CTGGCCCGCA CGATGGAGTA TTTCCGCATC CCGCGCACGG TGCTGACCGT GTGTCTGGGC AAGAGCACGT ACGCGCGCTG CGGGATCATC GTCAACGTCA CGCCGTTCGA GCCTGAATGG GAAGGGTACG TGACGCTCGA GTTCTCCAAC ACCACGCCGC TGCCCGCCAA GATCTACGCT GGGGAAGGCT GCGCGCAGGT GCTGTTCTTC GAGAGCGACG AGGAATGCGA AACCTCGTAC AAGGATCGTG GTGGCAAGTA CCAGGGCCAG CACGGTGTGA CGCTGCCCAA GACCTAG
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Protein sequence | MSIKSDKWIR RMAEQHGMIE PFEPDQVRES DGRRIVSYGT SSYGYDIRCA DEFKIFTNIN STIVDPKNFD EKSFVDFKGD VCIIPPNSFA LARTMEYFRI PRTVLTVCLG KSTYARCGII VNVTPFEPEW EGYVTLEFSN TTPLPAKIYA GEGCAQVLFF ESDEECETSY KDRGGKYQGQ HGVTLPKT
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