| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2571 |
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| Symbol | hemC |
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| ID | 6288586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2678845 |
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| End bp | 2679861 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642626144 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001900131 |
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| Protein GI | 187929644 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.902801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCCA ACGCCCGCCC GACTTCCCGT CAATCCCAGC TTGCAACGAC TCCTGCAGCC
CAGGCGCCGA CCAAGCTGGT CATTGCCTCG CGCGAGAGCC GGCTAGCCCT CTGGCAAGCC
GAACACGTGC GTGCTGCATT GCAAAAATAC TATCCCGCGT GCGACGTGTC CATCCTTGGA
ATGACCACGC GCGGCGACCA GATTCTCGAC CGCTCCCTCG CGAAGGTGGG GGGCAAGGGT
TTGTTCGTGA AGGAACTGGA AGTCGCGCTG GCCGAGGGGC GCGCAGATCT CGCCGTACAT
TCGCTCAAGG ATGTGCCGAT GGAATTGCCG GAAGGCTTTG CGCTGTCGGC CATCCTCGAA
CGCGAAGACC CGCGCGACGC CTTTATTTCC AACGACTACG CTGATCTGGC CTCGCTGCCT
GCCGGCGCCG TGGTGGGCAC GTCGAGCCTG CGCCGCGAGG CCTCGTTGAG GGCTCGGTTT
CCGCATCTGG TGATCCAGCC GCTGCGGGGC AACCTCGATA CGCGCCTCGG CAAGCTCGAT
CGCGGCGACT ACGCTGCCAT CATCCTGGCC GCTGCGGGGC TCAAGCGGCT GGGGTTGGTC
GATCGCATTC GCTCGACCAT CGCGCCGGAA GAATCGCTAC CGGCAGCCGG GCAAGGTGCG
CTCGGCATCG AAATTCGCGC CGATCGCGCA GACGTGCGAG CCTGCCTCGC GCCCCTGCAC
GATGAGCCCA CTGCACTGGC CGTGACGGCT GAACGCGCTG TTTCGCGCAT TCTCGGCGGT
TCGTGCCAGG TGCCACTCGC CTCGTTCGCG CAGTGGTCGG ACGGCGGCAC GCTGCGCCTG
CGCGCCTTTG TTGCTTCGCA GGACGGCACC CGCAAACTCG CCGCGGATGG CGAAGCCACG
CCATCTACGC TGGCCGAAGC CGACGCACTG GGCGTGCGCG TCGCCCAGCA GATGCTGGCC
GGCGGCGCAC GCGACATCCT TGCCATGCTG GGCGCCGACG CCCCACCCGC TACCTGA
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| Protein sequence | MSSNARPTSR QSQLATTPAA QAPTKLVIAS RESRLALWQA EHVRAALQKY YPACDVSILG
MTTRGDQILD RSLAKVGGKG LFVKELEVAL AEGRADLAVH SLKDVPMELP EGFALSAILE
REDPRDAFIS NDYADLASLP AGAVVGTSSL RREASLRARF PHLVIQPLRG NLDTRLGKLD
RGDYAAIILA AAGLKRLGLV DRIRSTIAPE ESLPAAGQGA LGIEIRADRA DVRACLAPLH
DEPTALAVTA ERAVSRILGG SCQVPLASFA QWSDGGTLRL RAFVASQDGT RKLAADGEAT
PSTLAEADAL GVRVAQQMLA GGARDILAML GADAPPAT
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