| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2568 |
|---|
| Symbol | |
|---|
| ID | 6286210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2674143 |
|---|
| End bp | 2675477 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642626141 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001900128 |
|---|
| Protein GI | 187929641 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCA CCACCCCACC CACCTCACCG GTCGGCGGCG CAGGCACGCT GCCACCCCAG
TCCGCAAGTG CATTTGAAGA AGCCACCTAC CGCAAAGTGA CGTGGCGCCT GGTTCCGTTC
CTGCTGCTGT GCTACGTGGT CGCGTATCTC GATCGCGTCA ACGTGGGCTT TGCCAAGCTG
CAGATGCTCA ACGACCTCAA GTTCAGCGAG ACCATCTACG GGCTCGGCGC CGGCATCTTC
TTCATCGGTT ACTTCCTCTT TGAAGTGCCG AGCAACGTGA TCCTGCACCG CGTGGGCGCA
CGCATCTGGA TCGCGCGGAT CATGATCTCG TGGGGCATCA TCTCGGCGGC CATGATGTTC
GTGACCACGC CGGCCATGTT CTACGTGATG CGCTTCCTGC TGGGGCTGGC AGAAGCCGGC
TTCTTCCCGG GGATCATCCT GTACCTCACG TATTGGTATC CGGCGCAGCG GCGCGGGCGC
ACCACCACCT TCTTCATGAC GGCAATTGCG CTGTCGGGCG TGATCGGCGG CCCCATCTCG
GGCTGGGCGA TGAAGGCGTT TGCCGGCGTC TACGGCCTGG CCGGCTGGCA GTGGATGTTC
CTGATCGAAG GCATTCCGTC GATCATCGTC GGCATCGTCG TGCTGGCGTA TCTGGACGAC
CGCATCAGCC ACGCGAAGTG GCTGACTGAC GAAGAGAAGG CGCTGCTCGC GCGCAACATC
GCCGCGGAAG ACGCCGAGAA GGAAGACCCG CCCATCCGCA CCGTCATGGC CAGCCCGCGC
GTATGGCTGA TGAGCCTGAT CTACTTCACC TTCGTGATGG GCCTGTATGG CGTGAGCTTC
TGGCTGCCGA CGCTGATCAA GCAGACCGGC GTGGCCGATC CGTTCTCGGT CGGCCTGCTG
ACGGCGATTC CGTACGGCGC AGCAGTCGTC GCGATGGTCC TGGTGGCACG CAGCGCCGAT
CGCCTGCGCG AGCGCCGCTG GCACATCGCG ATTCCCGCAG TGGTGGGCGC GGTCGGGCTC
GTACTGTCAG CCGTCTGGCA CACCGACACC ATGCTGGCCA TGGCCGCACT CACGCTCGGC
ACCATGGGCA TCCTGACCAC GTTACCGCTG TTCTGGAGCC TGCCGACTGC GTTCCTGGCC
GGCACCGGTG CCGCCGCCGG CATTGCGCTC ATCAATTCGC TGGGCAACCT CGCGGGCTTC
CTGAGCCCCT ACGCCGTCGG CTGGCTGAAA GACGCCACGC AGAGCACCGA TTCGGGCATG
TACATGCTGG CCACGTCGAT GGTGCTGGGT GCGATCCTCA CGCTTTCCGT ACCAGCACGG
ATGGTGAACA AATAG
|
|---|
| Protein sequence | MATTTPPTSP VGGAGTLPPQ SASAFEEATY RKVTWRLVPF LLLCYVVAYL DRVNVGFAKL
QMLNDLKFSE TIYGLGAGIF FIGYFLFEVP SNVILHRVGA RIWIARIMIS WGIISAAMMF
VTTPAMFYVM RFLLGLAEAG FFPGIILYLT YWYPAQRRGR TTTFFMTAIA LSGVIGGPIS
GWAMKAFAGV YGLAGWQWMF LIEGIPSIIV GIVVLAYLDD RISHAKWLTD EEKALLARNI
AAEDAEKEDP PIRTVMASPR VWLMSLIYFT FVMGLYGVSF WLPTLIKQTG VADPFSVGLL
TAIPYGAAVV AMVLVARSAD RLRERRWHIA IPAVVGAVGL VLSAVWHTDT MLAMAALTLG
TMGILTTLPL FWSLPTAFLA GTGAAAGIAL INSLGNLAGF LSPYAVGWLK DATQSTDSGM
YMLATSMVLG AILTLSVPAR MVNK
|
|---|
| |