Gene Rpic_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2553 
Symbol 
ID6289385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2659436 
End bp2660344 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID642626126 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001900113 
Protein GI187929626 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.36259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAGC GTTCATGCGG GGATTGTCGC AGAATCCGCC CGCCGGCCGG TTCCCACGGC 
AACGTCAGGC AGCGCGTGCG TCCAACGCCG GCTCCTCTGC GACCGGGCTG CTCCGGCCAA
TCCACCATCA GCACGCAGCT GTCCACGCTC GAAACCCGCC TGGGCTACCG CCTATGCGAA
CGCGGCCGCA GCGGCTTCCG GCTCACCGCG CGCGGCGAAC GCTTCGTCGA TTCCGCACGC
AAGCTGCTGG GCGCGCTCGA TGTCTTCAGC GCAGAGGCCC GCAAGGTGGG GCGTACTCTG
GTCGGCACGT TGAATCTCGG ATTGATCGGT CATGCGCCCA TCAACGCGAA TGCGCGCATC
AGTCAGGCCA TCGAGCGCTT TCGGGAGCGC GATGAATCCG TGCATTTCAT GGTCTCGGTG
CGCCCGCCCG GGGAGCTGGA AGGACTGCTG CTCGACAACA AGATCCACAT GGCGATCGGC
TATTTCTGGC ACCGTGTGCC GGCGCTGGAC TACACGACGA TCTTCCACGA GACGCAGCTT
GCGTATGCGG GACGCGGCCA TCCGCTGTTC CGCAAGGCTG GGGACGTGAC GCCCGCGCAG
GCGCTGGCGC ACGCATGGGC GTGGCGCAGC TATCCGCTGC CCGAAGCGGC GGGGTCGCCG
GCCGAGCGGC CGGTGACTGC GGTGGCAGAC AACATGGAAG CGGTGGCAAT GCTGGTGCTT
TCGGGCCGGC ACCTGGGTTA CCTGCCGGAG CACTTTGCGG CGCCCTATGT GGCCCAGGGC
CTGTTGACGC CGTTGGCACC GGCAGCCATG CGCTACGAGG TGCCGTTCGA CATGGCGGTG
CGCCGCGACG CCCGGCGCAA TGATCTGCTG GCCGCCTTCA TCGCTGACAT GAAAGCGGCC
CACGCCTGA
 
Protein sequence
MRKRSCGDCR RIRPPAGSHG NVRQRVRPTP APLRPGCSGQ STISTQLSTL ETRLGYRLCE 
RGRSGFRLTA RGERFVDSAR KLLGALDVFS AEARKVGRTL VGTLNLGLIG HAPINANARI
SQAIERFRER DESVHFMVSV RPPGELEGLL LDNKIHMAIG YFWHRVPALD YTTIFHETQL
AYAGRGHPLF RKAGDVTPAQ ALAHAWAWRS YPLPEAAGSP AERPVTAVAD NMEAVAMLVL
SGRHLGYLPE HFAAPYVAQG LLTPLAPAAM RYEVPFDMAV RRDARRNDLL AAFIADMKAA
HA